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WBP1 (WW domain binding protein 1)

Identity

Alias_symbol (synonym)WBP-1
Other alias
HGNC (Hugo) WBP1
LocusID (NCBI) 23559
Atlas_Id 75682
Location 2p13.1  [Link to chromosome band 2p13]
Location_base_pair Starts at 74685527 and ends at 74688018 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
INO80B (2p13.1) / WBP1 (2p13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WBP1   12737
Cards
Entrez_Gene (NCBI)WBP1  23559  WW domain binding protein 1
AliasesWBP-1
GeneCards (Weizmann)WBP1
Ensembl hg19 (Hinxton)ENSG00000239779 [Gene_View]  chr2:74685527-74688018 [Contig_View]  WBP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000239779 [Gene_View]  chr2:74685527-74688018 [Contig_View]  WBP1 [Vega]
ICGC DataPortalENSG00000239779
TCGA cBioPortalWBP1
AceView (NCBI)WBP1
Genatlas (Paris)WBP1
WikiGenes23559
SOURCE (Princeton)WBP1
Genetics Home Reference (NIH)WBP1
Genomic and cartography
GoldenPath hg19 (UCSC)WBP1  -     chr2:74685527-74688018 +  2p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)WBP1  -     2p13.1   [Description]    (hg38-Dec_2013)
EnsemblWBP1 - 2p13.1 [CytoView hg19]  WBP1 - 2p13.1 [CytoView hg38]
Mapping of homologs : NCBIWBP1 [Mapview hg19]  WBP1 [Mapview hg38]
OMIM606961   
Gene and transcription
Genbank (Entrez)AA635803 AF087888 AK094297 AK315745 BC010012
RefSeq transcript (Entrez)NM_012477
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)WBP1
Cluster EST : UnigeneHs.516114 [ NCBI ]
CGAP (NCI)Hs.516114
Alternative Splicing GalleryENSG00000239779
Gene ExpressionWBP1 [ NCBI-GEO ]   WBP1 [ EBI - ARRAY_EXPRESS ]   WBP1 [ SEEK ]   WBP1 [ MEM ]
Gene Expression Viewer (FireBrowse)WBP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23559
GTEX Portal (Tissue expression)WBP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96G27   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96G27  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96G27
Splice isoforms : SwissVarQ96G27
PhosPhoSitePlusQ96G27
Domains : Interpro (EBI)Uncharacterised_WW-bd   
Domain families : Pfam (Sanger)WBP-1 (PF11669)   
Domain families : Pfam (NCBI)pfam11669   
Conserved Domain (NCBI)WBP1
DMDM Disease mutations23559
Blocks (Seattle)WBP1
PDB (SRS)1JMQ    1K5R   
PDB (PDBSum)1JMQ    1K5R   
PDB (IMB)1JMQ    1K5R   
PDB (RSDB)1JMQ    1K5R   
Structural Biology KnowledgeBase1JMQ    1K5R   
SCOP (Structural Classification of Proteins)1JMQ    1K5R   
CATH (Classification of proteins structures)1JMQ    1K5R   
SuperfamilyQ96G27
Human Protein AtlasENSG00000239779
Peptide AtlasQ96G27
HPRD09510
IPIIPI00032048   IPI00789055   IPI00917557   IPI00917732   
Protein Interaction databases
DIP (DOE-UCLA)Q96G27
IntAct (EBI)Q96G27
FunCoupENSG00000239779
BioGRIDWBP1
STRING (EMBL)WBP1
ZODIACWBP1
Ontologies - Pathways
QuickGOQ96G27
Ontology : AmiGOprotein binding  cellular_component  biological_process  WW domain binding  WW domain binding  
Ontology : EGO-EBIprotein binding  cellular_component  biological_process  WW domain binding  WW domain binding  
NDEx NetworkWBP1
Atlas of Cancer Signalling NetworkWBP1
Wikipedia pathwaysWBP1
Orthology - Evolution
OrthoDB23559
GeneTree (enSembl)ENSG00000239779
Phylogenetic Trees/Animal Genes : TreeFamWBP1
HOVERGENQ96G27
HOGENOMQ96G27
Homologs : HomoloGeneWBP1
Homology/Alignments : Family Browser (UCSC)WBP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWBP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WBP1
dbVarWBP1
ClinVarWBP1
1000_GenomesWBP1 
Exome Variant ServerWBP1
ExAC (Exome Aggregation Consortium)WBP1 (select the gene name)
Genetic variants : HAPMAP23559
Genomic Variants (DGV)WBP1 [DGVbeta]
DECIPHER (Syndromes)2:74685527-74688018  ENSG00000239779
CONAN: Copy Number AnalysisWBP1 
Mutations
ICGC Data PortalWBP1 
TCGA Data PortalWBP1 
Broad Tumor PortalWBP1
OASIS PortalWBP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWBP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWBP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WBP1
DgiDB (Drug Gene Interaction Database)WBP1
DoCM (Curated mutations)WBP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WBP1 (select a term)
intoGenWBP1
Cancer3DWBP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606961   
Orphanet
MedgenWBP1
Genetic Testing Registry WBP1
NextProtQ96G27 [Medical]
TSGene23559
GENETestsWBP1
Huge Navigator WBP1 [HugePedia]
snp3D : Map Gene to Disease23559
BioCentury BCIQWBP1
ClinGenWBP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23559
Chemical/Pharm GKB GenePA37348
Clinical trialWBP1
Miscellaneous
canSAR (ICR)WBP1 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWBP1
EVEXWBP1
GoPubMedWBP1
iHOPWBP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:51:30 CET 2017

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