Atlas of Genetics and Cytogenetics in Oncology and Haematology


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WBP2NL (WBP2 N-terminal like)

Identity

Alias_symbol (synonym)FLJ26145
MGC26816
PAWP
GRAMD7
Other alias
HGNC (Hugo) WBP2NL
LocusID (NCBI) 164684
Atlas_Id 55633
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 42394729 and ends at 42424477 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
NAGA (22q13.2) / WBP2NL (22q13.2)WBP2NL (22q13.2) / ELK1 (Xp11.23)WBP2NL (22q13.2) / MEI1 (22q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WBP2NL   28389
Cards
Entrez_Gene (NCBI)WBP2NL  164684  WBP2 N-terminal like
AliasesGRAMD7; PAWP
GeneCards (Weizmann)WBP2NL
Ensembl hg19 (Hinxton)ENSG00000183066 [Gene_View]  chr22:42394729-42424477 [Contig_View]  WBP2NL [Vega]
Ensembl hg38 (Hinxton)ENSG00000183066 [Gene_View]  chr22:42394729-42424477 [Contig_View]  WBP2NL [Vega]
ICGC DataPortalENSG00000183066
TCGA cBioPortalWBP2NL
AceView (NCBI)WBP2NL
Genatlas (Paris)WBP2NL
WikiGenes164684
SOURCE (Princeton)WBP2NL
Genetics Home Reference (NIH)WBP2NL
Genomic and cartography
GoldenPath hg19 (UCSC)WBP2NL  -     chr22:42394729-42424477 +  22q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)WBP2NL  -     22q13.2   [Description]    (hg38-Dec_2013)
EnsemblWBP2NL - 22q13.2 [CytoView hg19]  WBP2NL - 22q13.2 [CytoView hg38]
Mapping of homologs : NCBIWBP2NL [Mapview hg19]  WBP2NL [Mapview hg38]
OMIM610981   
Gene and transcription
Genbank (Entrez)AF393575 AK128138 AK129656 AK296138 BC022546
RefSeq transcript (Entrez)NM_152613
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)WBP2NL
Cluster EST : UnigeneHs.655541 [ NCBI ]
CGAP (NCI)Hs.655541
Alternative Splicing GalleryENSG00000183066
Gene ExpressionWBP2NL [ NCBI-GEO ]   WBP2NL [ EBI - ARRAY_EXPRESS ]   WBP2NL [ SEEK ]   WBP2NL [ MEM ]
Gene Expression Viewer (FireBrowse)WBP2NL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)164684
GTEX Portal (Tissue expression)WBP2NL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ICG8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ICG8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ICG8
Splice isoforms : SwissVarQ6ICG8
PhosPhoSitePlusQ6ICG8
Domains : Interpro (EBI)GRAM    PH_dom-like    WW-domain-binding   
Domain families : Pfam (Sanger)GRAM (PF02893)    WWbp (PF10349)   
Domain families : Pfam (NCBI)pfam02893    pfam10349   
Conserved Domain (NCBI)WBP2NL
DMDM Disease mutations164684
Blocks (Seattle)WBP2NL
SuperfamilyQ6ICG8
Human Protein AtlasENSG00000183066
Peptide AtlasQ6ICG8
HPRD14512
IPIIPI00152200   IPI01012891   IPI00894407   IPI00894190   
Protein Interaction databases
DIP (DOE-UCLA)Q6ICG8
IntAct (EBI)Q6ICG8
FunCoupENSG00000183066
BioGRIDWBP2NL
STRING (EMBL)WBP2NL
ZODIACWBP2NL
Ontologies - Pathways
QuickGOQ6ICG8
Ontology : AmiGOegg activation  perinuclear theca  male pronucleus assembly  WW domain binding  meiotic cell cycle  
Ontology : EGO-EBIegg activation  perinuclear theca  male pronucleus assembly  WW domain binding  meiotic cell cycle  
NDEx NetworkWBP2NL
Atlas of Cancer Signalling NetworkWBP2NL
Wikipedia pathwaysWBP2NL
Orthology - Evolution
OrthoDB164684
GeneTree (enSembl)ENSG00000183066
Phylogenetic Trees/Animal Genes : TreeFamWBP2NL
HOVERGENQ6ICG8
HOGENOMQ6ICG8
Homologs : HomoloGeneWBP2NL
Homology/Alignments : Family Browser (UCSC)WBP2NL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWBP2NL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WBP2NL
dbVarWBP2NL
ClinVarWBP2NL
1000_GenomesWBP2NL 
Exome Variant ServerWBP2NL
ExAC (Exome Aggregation Consortium)WBP2NL (select the gene name)
Genetic variants : HAPMAP164684
Genomic Variants (DGV)WBP2NL [DGVbeta]
DECIPHER (Syndromes)22:42394729-42424477  ENSG00000183066
CONAN: Copy Number AnalysisWBP2NL 
Mutations
ICGC Data PortalWBP2NL 
TCGA Data PortalWBP2NL 
Broad Tumor PortalWBP2NL
OASIS PortalWBP2NL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWBP2NL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWBP2NL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WBP2NL
DgiDB (Drug Gene Interaction Database)WBP2NL
DoCM (Curated mutations)WBP2NL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WBP2NL (select a term)
intoGenWBP2NL
Cancer3DWBP2NL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610981   
Orphanet
MedgenWBP2NL
Genetic Testing Registry WBP2NL
NextProtQ6ICG8 [Medical]
TSGene164684
GENETestsWBP2NL
Huge Navigator WBP2NL [HugePedia]
snp3D : Map Gene to Disease164684
BioCentury BCIQWBP2NL
ClinGenWBP2NL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD164684
Chemical/Pharm GKB GenePA145147710
Clinical trialWBP2NL
Miscellaneous
canSAR (ICR)WBP2NL (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWBP2NL
EVEXWBP2NL
GoPubMedWBP2NL
iHOPWBP2NL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:34:05 CET 2017

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