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WBP5 (WW domain binding protein 5)

Identity

Other aliasTCEAL9
WEX6
HGNC (Hugo) WBP5
LocusID (NCBI) 51186
Atlas_Id 75689
Location Xq22.2  [Link to chromosome band Xq22]
Location_base_pair Starts at 102611380 and ends at 102613397 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WBP5   30084
Cards
Entrez_Gene (NCBI)WBP5  51186  WW domain binding protein 5
AliasesTCEAL9; WEX6
GeneCards (Weizmann)WBP5
Ensembl hg19 (Hinxton)ENSG00000185222 [Gene_View]  chrX:102611380-102613397 [Contig_View]  WBP5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185222 [Gene_View]  chrX:102611380-102613397 [Contig_View]  WBP5 [Vega]
ICGC DataPortalENSG00000185222
TCGA cBioPortalWBP5
AceView (NCBI)WBP5
Genatlas (Paris)WBP5
WikiGenes51186
SOURCE (Princeton)WBP5
Genetics Home Reference (NIH)WBP5
Genomic and cartography
GoldenPath hg19 (UCSC)WBP5  -     chrX:102611380-102613397 +  Xq22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)WBP5  -     Xq22.2   [Description]    (hg38-Dec_2013)
EnsemblWBP5 - Xq22.2 [CytoView hg19]  WBP5 - Xq22.2 [CytoView hg38]
Mapping of homologs : NCBIWBP5 [Mapview hg19]  WBP5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF125535 AK312190 AL833152 BC023544 BG400091
RefSeq transcript (Entrez)NM_001006612 NM_001006613 NM_001006614 NM_016303
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011651 NW_004929444
Consensus coding sequences : CCDS (NCBI)WBP5
Cluster EST : UnigeneHs.533287 [ NCBI ]
CGAP (NCI)Hs.533287
Alternative Splicing GalleryENSG00000185222
Gene ExpressionWBP5 [ NCBI-GEO ]   WBP5 [ EBI - ARRAY_EXPRESS ]   WBP5 [ SEEK ]   WBP5 [ MEM ]
Gene Expression Viewer (FireBrowse)WBP5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51186
GTEX Portal (Tissue expression)WBP5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UHQ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UHQ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UHQ7
Splice isoforms : SwissVarQ9UHQ7
PhosPhoSitePlusQ9UHQ7
Domains : Interpro (EBI)TF_A-like/BEX-like    TFA   
Domain families : Pfam (Sanger)BEX (PF04538)   
Domain families : Pfam (NCBI)pfam04538   
Conserved Domain (NCBI)WBP5
DMDM Disease mutations51186
Blocks (Seattle)WBP5
SuperfamilyQ9UHQ7
Human Protein AtlasENSG00000185222
Peptide AtlasQ9UHQ7
HPRD06621
IPIIPI00008434   
Protein Interaction databases
DIP (DOE-UCLA)Q9UHQ7
IntAct (EBI)Q9UHQ7
FunCoupENSG00000185222
BioGRIDWBP5
STRING (EMBL)WBP5
ZODIACWBP5
Ontologies - Pathways
QuickGOQ9UHQ7
Ontology : AmiGOWW domain binding  
Ontology : EGO-EBIWW domain binding  
NDEx NetworkWBP5
Atlas of Cancer Signalling NetworkWBP5
Wikipedia pathwaysWBP5
Orthology - Evolution
OrthoDB51186
GeneTree (enSembl)ENSG00000185222
Phylogenetic Trees/Animal Genes : TreeFamWBP5
HOVERGENQ9UHQ7
HOGENOMQ9UHQ7
Homologs : HomoloGeneWBP5
Homology/Alignments : Family Browser (UCSC)WBP5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWBP5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WBP5
dbVarWBP5
ClinVarWBP5
1000_GenomesWBP5 
Exome Variant ServerWBP5
ExAC (Exome Aggregation Consortium)WBP5 (select the gene name)
Genetic variants : HAPMAP51186
Genomic Variants (DGV)WBP5 [DGVbeta]
DECIPHER (Syndromes)X:102611380-102613397  ENSG00000185222
CONAN: Copy Number AnalysisWBP5 
Mutations
ICGC Data PortalWBP5 
TCGA Data PortalWBP5 
Broad Tumor PortalWBP5
OASIS PortalWBP5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWBP5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWBP5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WBP5
DgiDB (Drug Gene Interaction Database)WBP5
DoCM (Curated mutations)WBP5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WBP5 (select a term)
intoGenWBP5
Cancer3DWBP5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWBP5
Genetic Testing Registry WBP5
NextProtQ9UHQ7 [Medical]
TSGene51186
GENETestsWBP5
Huge Navigator WBP5 [HugePedia]
snp3D : Map Gene to Disease51186
BioCentury BCIQWBP5
ClinGenWBP5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51186
Chemical/Pharm GKB GenePA134921975
Clinical trialWBP5
Miscellaneous
canSAR (ICR)WBP5 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWBP5
EVEXWBP5
GoPubMedWBP5
iHOPWBP5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:51:31 CET 2017

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