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WDCP (WD repeat and coiled coil containing)

Identity

Alias_namesC2orf44
chromosome 2 open reading frame 44
Alias_symbol (synonym)FLJ21945
Other aliasPP384
HGNC (Hugo) WDCP
LocusID (NCBI) 80304
Atlas_Id 78447
Location 2p23.3  [Link to chromosome band 2p23]
Location_base_pair Starts at 24029336 and ends at 24047426 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDCP   26157
Cards
Entrez_Gene (NCBI)WDCP  80304  WD repeat and coiled coil containing
AliasesC2orf44; PP384
GeneCards (Weizmann)WDCP
Ensembl hg19 (Hinxton)ENSG00000163026 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163026 [Gene_View]  chr2:24029336-24047426 [Contig_View]  WDCP [Vega]
ICGC DataPortalENSG00000163026
TCGA cBioPortalWDCP
AceView (NCBI)WDCP
Genatlas (Paris)WDCP
WikiGenes80304
SOURCE (Princeton)WDCP
Genetics Home Reference (NIH)WDCP
Genomic and cartography
GoldenPath hg38 (UCSC)WDCP  -     chr2:24029336-24047426 -  2p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WDCP  -     2p23.3   [Description]    (hg19-Feb_2009)
EnsemblWDCP - 2p23.3 [CytoView hg19]  WDCP - 2p23.3 [CytoView hg38]
Mapping of homologs : NCBIWDCP [Mapview hg19]  WDCP [Mapview hg38]
OMIM616234   
Gene and transcription
Genbank (Entrez)AF218013 AI800484 AK025598 BC035698 CX756689
RefSeq transcript (Entrez)NM_001142319 NM_025203
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WDCP
Cluster EST : UnigeneHs.24624 [ NCBI ]
CGAP (NCI)Hs.24624
Alternative Splicing GalleryENSG00000163026
Gene ExpressionWDCP [ NCBI-GEO ]   WDCP [ EBI - ARRAY_EXPRESS ]   WDCP [ SEEK ]   WDCP [ MEM ]
Gene Expression Viewer (FireBrowse)WDCP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80304
GTEX Portal (Tissue expression)WDCP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6R7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H6R7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H6R7
Splice isoforms : SwissVarQ9H6R7
PhosPhoSitePlusQ9H6R7
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WDCP   
Domain families : Pfam (Sanger)DUF4613 (PF15390)   
Domain families : Pfam (NCBI)pfam15390   
Conserved Domain (NCBI)WDCP
DMDM Disease mutations80304
Blocks (Seattle)WDCP
SuperfamilyQ9H6R7
Human Protein AtlasENSG00000163026
Peptide AtlasQ9H6R7
HPRD07972
IPIIPI00018786   IPI00855958   IPI00855990   IPI00892623   
Protein Interaction databases
DIP (DOE-UCLA)Q9H6R7
IntAct (EBI)Q9H6R7
FunCoupENSG00000163026
BioGRIDWDCP
STRING (EMBL)WDCP
ZODIACWDCP
Ontologies - Pathways
QuickGOQ9H6R7
Ontology : AmiGOkinase binding  protein oligomerization  
Ontology : EGO-EBIkinase binding  protein oligomerization  
NDEx NetworkWDCP
Atlas of Cancer Signalling NetworkWDCP
Wikipedia pathwaysWDCP
Orthology - Evolution
OrthoDB80304
GeneTree (enSembl)ENSG00000163026
Phylogenetic Trees/Animal Genes : TreeFamWDCP
HOVERGENQ9H6R7
HOGENOMQ9H6R7
Homologs : HomoloGeneWDCP
Homology/Alignments : Family Browser (UCSC)WDCP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDCP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDCP
dbVarWDCP
ClinVarWDCP
1000_GenomesWDCP 
Exome Variant ServerWDCP
ExAC (Exome Aggregation Consortium)WDCP (select the gene name)
Genetic variants : HAPMAP80304
Genomic Variants (DGV)WDCP [DGVbeta]
DECIPHERWDCP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWDCP 
Mutations
ICGC Data PortalWDCP 
TCGA Data PortalWDCP 
Broad Tumor PortalWDCP
OASIS PortalWDCP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDWDCP
BioMutasearch WDCP
DgiDB (Drug Gene Interaction Database)WDCP
DoCM (Curated mutations)WDCP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDCP (select a term)
intoGenWDCP
Cancer3DWDCP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616234   
Orphanet
MedgenWDCP
Genetic Testing Registry WDCP
NextProtQ9H6R7 [Medical]
TSGene80304
GENETestsWDCP
Target ValidationWDCP
Huge Navigator WDCP [HugePedia]
snp3D : Map Gene to Disease80304
BioCentury BCIQWDCP
ClinGenWDCP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80304
Chemical/Pharm GKB GenePA147358716
Clinical trialWDCP
Miscellaneous
canSAR (ICR)WDCP (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDCP
EVEXWDCP
GoPubMedWDCP
iHOPWDCP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:53 CEST 2017

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