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WDR37 (WD repeat domain 37)

Identity

Alias_symbol (synonym)KIAA0982
Other alias-
HGNC (Hugo) WDR37
LocusID (NCBI) 22884
Atlas_Id 75710
Location 10p15.3  [Link to chromosome band 10p15]
Location_base_pair Starts at 1102776 and ends at 1178237 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
L3MBTL3 (6q23.1) / WDR37 (10p15.3)TRIM2 (4q31.3) / WDR37 (10p15.3)WDR37 (10p15.3) / FAM107B (10p13)
WDR37 (10p15.3) / TUBAL3 (10p15.1)WDR37 (10p15.3) / WDR37 (10p15.3)ZNF331 (19q13.42) / WDR37 (10p15.3)
WDR37 FAM107BWDR37 TUBAL3L3MBTL3 WDR37
TRIM2 WDR37

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDR37   31406
Cards
Entrez_Gene (NCBI)WDR37  22884  WD repeat domain 37
Aliases
GeneCards (Weizmann)WDR37
Ensembl hg19 (Hinxton)ENSG00000047056 [Gene_View]  chr10:1102776-1178237 [Contig_View]  WDR37 [Vega]
Ensembl hg38 (Hinxton)ENSG00000047056 [Gene_View]  chr10:1102776-1178237 [Contig_View]  WDR37 [Vega]
ICGC DataPortalENSG00000047056
TCGA cBioPortalWDR37
AceView (NCBI)WDR37
Genatlas (Paris)WDR37
WikiGenes22884
SOURCE (Princeton)WDR37
Genetics Home Reference (NIH)WDR37
Genomic and cartography
GoldenPath hg19 (UCSC)WDR37  -     chr10:1102776-1178237 +  10p15.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)WDR37  -     10p15.3   [Description]    (hg38-Dec_2013)
EnsemblWDR37 - 10p15.3 [CytoView hg19]  WDR37 - 10p15.3 [CytoView hg38]
Mapping of homologs : NCBIWDR37 [Mapview hg19]  WDR37 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB023199 AK024605 AK125050 AK128194 AK292591
RefSeq transcript (Entrez)NM_014023
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_008705 NW_004929370
Consensus coding sequences : CCDS (NCBI)WDR37
Cluster EST : UnigeneHs.188495 [ NCBI ]
CGAP (NCI)Hs.188495
Alternative Splicing GalleryENSG00000047056
Gene ExpressionWDR37 [ NCBI-GEO ]   WDR37 [ EBI - ARRAY_EXPRESS ]   WDR37 [ SEEK ]   WDR37 [ MEM ]
Gene Expression Viewer (FireBrowse)WDR37 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22884
GTEX Portal (Tissue expression)WDR37
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2I8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2I8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2I8
Splice isoforms : SwissVarQ9Y2I8
PhosPhoSitePlusQ9Y2I8
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)G-protein_beta_WD-40_rep    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)WDR37
DMDM Disease mutations22884
Blocks (Seattle)WDR37
SuperfamilyQ9Y2I8
Human Protein AtlasENSG00000047056
Peptide AtlasQ9Y2I8
HPRD15668
IPIIPI00032202   IPI00741027   IPI00979928   IPI00896485   IPI00642178   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2I8
IntAct (EBI)Q9Y2I8
FunCoupENSG00000047056
BioGRIDWDR37
STRING (EMBL)WDR37
ZODIACWDR37
Ontologies - Pathways
QuickGOQ9Y2I8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkWDR37
Atlas of Cancer Signalling NetworkWDR37
Wikipedia pathwaysWDR37
Orthology - Evolution
OrthoDB22884
GeneTree (enSembl)ENSG00000047056
Phylogenetic Trees/Animal Genes : TreeFamWDR37
HOVERGENQ9Y2I8
HOGENOMQ9Y2I8
Homologs : HomoloGeneWDR37
Homology/Alignments : Family Browser (UCSC)WDR37
Gene fusions - Rearrangements
Fusion: TCGAWDR37 FAM107B
Fusion: TCGAWDR37 TUBAL3
Fusion: TCGAL3MBTL3 WDR37
Fusion: TCGATRIM2 WDR37
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDR37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDR37
dbVarWDR37
ClinVarWDR37
1000_GenomesWDR37 
Exome Variant ServerWDR37
ExAC (Exome Aggregation Consortium)WDR37 (select the gene name)
Genetic variants : HAPMAP22884
Genomic Variants (DGV)WDR37 [DGVbeta]
DECIPHER (Syndromes)10:1102776-1178237  ENSG00000047056
CONAN: Copy Number AnalysisWDR37 
Mutations
ICGC Data PortalWDR37 
TCGA Data PortalWDR37 
Broad Tumor PortalWDR37
OASIS PortalWDR37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWDR37  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWDR37
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WDR37
DgiDB (Drug Gene Interaction Database)WDR37
DoCM (Curated mutations)WDR37 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDR37 (select a term)
intoGenWDR37
Cancer3DWDR37(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWDR37
Genetic Testing Registry WDR37
NextProtQ9Y2I8 [Medical]
TSGene22884
GENETestsWDR37
Huge Navigator WDR37 [HugePedia]
snp3D : Map Gene to Disease22884
BioCentury BCIQWDR37
ClinGenWDR37
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22884
Chemical/Pharm GKB GenePA134922218
Clinical trialWDR37
Miscellaneous
canSAR (ICR)WDR37 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDR37
EVEXWDR37
GoPubMedWDR37
iHOPWDR37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:51:35 CET 2017

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