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WDR63 (WD repeat domain 63)

Identity

Alias_symbol (synonym)DIC3
FLJ30067
NYD-SP29
Other alias
HGNC (Hugo) WDR63
LocusID (NCBI) 126820
Atlas_Id 75725
Location 1p22.3  [Link to chromosome band 1p22]
Location_base_pair Starts at 85062298 and ends at 85133138 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDR63   30711
Cards
Entrez_Gene (NCBI)WDR63  126820  WD repeat domain 63
AliasesDIC3; NYD-SP29
GeneCards (Weizmann)WDR63
Ensembl hg19 (Hinxton)ENSG00000162643 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162643 [Gene_View]  chr1:85062298-85133138 [Contig_View]  WDR63 [Vega]
ICGC DataPortalENSG00000162643
TCGA cBioPortalWDR63
AceView (NCBI)WDR63
Genatlas (Paris)WDR63
WikiGenes126820
SOURCE (Princeton)WDR63
Genetics Home Reference (NIH)WDR63
Genomic and cartography
GoldenPath hg38 (UCSC)WDR63  -     chr1:85062298-85133138 +  1p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WDR63  -     1p22.3   [Description]    (hg19-Feb_2009)
EnsemblWDR63 - 1p22.3 [CytoView hg19]  WDR63 - 1p22.3 [CytoView hg38]
Mapping of homologs : NCBIWDR63 [Mapview hg19]  WDR63 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK054629 AK292603 AY049724 BC040265 BX648851
RefSeq transcript (Entrez)NM_001288563 NM_145172
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WDR63
Cluster EST : UnigeneHs.97933 [ NCBI ]
CGAP (NCI)Hs.97933
Alternative Splicing GalleryENSG00000162643
Gene ExpressionWDR63 [ NCBI-GEO ]   WDR63 [ EBI - ARRAY_EXPRESS ]   WDR63 [ SEEK ]   WDR63 [ MEM ]
Gene Expression Viewer (FireBrowse)WDR63 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126820
GTEX Portal (Tissue expression)WDR63
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IWG1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IWG1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IWG1
Splice isoforms : SwissVarQ8IWG1
PhosPhoSitePlusQ8IWG1
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)   
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)WDR63
DMDM Disease mutations126820
Blocks (Seattle)WDR63
SuperfamilyQ8IWG1
Human Protein AtlasENSG00000162643
Peptide AtlasQ8IWG1
HPRD11409
IPIIPI00332144   IPI00293098   IPI00983568   IPI00984100   IPI00977936   
Protein Interaction databases
DIP (DOE-UCLA)Q8IWG1
IntAct (EBI)Q8IWG1
FunCoupENSG00000162643
BioGRIDWDR63
STRING (EMBL)WDR63
ZODIACWDR63
Ontologies - Pathways
QuickGOQ8IWG1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkWDR63
Atlas of Cancer Signalling NetworkWDR63
Wikipedia pathwaysWDR63
Orthology - Evolution
OrthoDB126820
GeneTree (enSembl)ENSG00000162643
Phylogenetic Trees/Animal Genes : TreeFamWDR63
HOVERGENQ8IWG1
HOGENOMQ8IWG1
Homologs : HomoloGeneWDR63
Homology/Alignments : Family Browser (UCSC)WDR63
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDR63 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDR63
dbVarWDR63
ClinVarWDR63
1000_GenomesWDR63 
Exome Variant ServerWDR63
ExAC (Exome Aggregation Consortium)WDR63 (select the gene name)
Genetic variants : HAPMAP126820
Genomic Variants (DGV)WDR63 [DGVbeta]
DECIPHERWDR63 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWDR63 
Mutations
ICGC Data PortalWDR63 
TCGA Data PortalWDR63 
Broad Tumor PortalWDR63
OASIS PortalWDR63 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWDR63  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWDR63
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WDR63
DgiDB (Drug Gene Interaction Database)WDR63
DoCM (Curated mutations)WDR63 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDR63 (select a term)
intoGenWDR63
Cancer3DWDR63(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWDR63
Genetic Testing Registry WDR63
NextProtQ8IWG1 [Medical]
TSGene126820
GENETestsWDR63
Target ValidationWDR63
Huge Navigator WDR63 [HugePedia]
snp3D : Map Gene to Disease126820
BioCentury BCIQWDR63
ClinGenWDR63
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126820
Chemical/Pharm GKB GenePA142670596
Clinical trialWDR63
Miscellaneous
canSAR (ICR)WDR63 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDR63
EVEXWDR63
GoPubMedWDR63
iHOPWDR63
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:58 CEST 2017

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