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WDR64 (WD repeat domain 64)

Identity

Alias_symbol (synonym)FLJ32978
Other alias-
HGNC (Hugo) WDR64
LocusID (NCBI) 128025
Atlas_Id 75726
Location 1q43  [Link to chromosome band 1q43]
Location_base_pair Starts at 241652278 and ends at 241802132 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF670 (1q44) / WDR64 (1q43)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDR64   26570
Cards
Entrez_Gene (NCBI)WDR64  128025  WD repeat domain 64
Aliases
GeneCards (Weizmann)WDR64
Ensembl hg19 (Hinxton)ENSG00000162843 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162843 [Gene_View]  chr1:241652278-241802132 [Contig_View]  WDR64 [Vega]
ICGC DataPortalENSG00000162843
TCGA cBioPortalWDR64
AceView (NCBI)WDR64
Genatlas (Paris)WDR64
WikiGenes128025
SOURCE (Princeton)WDR64
Genetics Home Reference (NIH)WDR64
Genomic and cartography
GoldenPath hg38 (UCSC)WDR64  -     chr1:241652278-241802132 +  1q43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WDR64  -     1q43   [Description]    (hg19-Feb_2009)
EnsemblWDR64 - 1q43 [CytoView hg19]  WDR64 - 1q43 [CytoView hg38]
Mapping of homologs : NCBIWDR64 [Mapview hg19]  WDR64 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057540 AK122927 AY327404 BC148602 BC156932
RefSeq transcript (Entrez)NM_144625
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WDR64
Cluster EST : UnigeneHs.97527 [ NCBI ]
CGAP (NCI)Hs.97527
Alternative Splicing GalleryENSG00000162843
Gene ExpressionWDR64 [ NCBI-GEO ]   WDR64 [ EBI - ARRAY_EXPRESS ]   WDR64 [ SEEK ]   WDR64 [ MEM ]
Gene Expression Viewer (FireBrowse)WDR64 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)128025
GTEX Portal (Tissue expression)WDR64
Protein : pattern, domain, 3D structure
UniProt/SwissProtB1ANS9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB1ANS9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB1ANS9
Splice isoforms : SwissVarB1ANS9
PhosPhoSitePlusB1ANS9
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)WDR64
DMDM Disease mutations128025
Blocks (Seattle)WDR64
SuperfamilyB1ANS9
Human Protein AtlasENSG00000162843
Peptide AtlasB1ANS9
HPRD13412
IPIIPI00480208   IPI00641421   IPI00647783   IPI00478734   IPI00965824   
Protein Interaction databases
DIP (DOE-UCLA)B1ANS9
IntAct (EBI)B1ANS9
FunCoupENSG00000162843
BioGRIDWDR64
STRING (EMBL)WDR64
ZODIACWDR64
Ontologies - Pathways
QuickGOB1ANS9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkWDR64
Atlas of Cancer Signalling NetworkWDR64
Wikipedia pathwaysWDR64
Orthology - Evolution
OrthoDB128025
GeneTree (enSembl)ENSG00000162843
Phylogenetic Trees/Animal Genes : TreeFamWDR64
HOVERGENB1ANS9
HOGENOMB1ANS9
Homologs : HomoloGeneWDR64
Homology/Alignments : Family Browser (UCSC)WDR64
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDR64 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDR64
dbVarWDR64
ClinVarWDR64
1000_GenomesWDR64 
Exome Variant ServerWDR64
ExAC (Exome Aggregation Consortium)WDR64 (select the gene name)
Genetic variants : HAPMAP128025
Genomic Variants (DGV)WDR64 [DGVbeta]
DECIPHERWDR64 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWDR64 
Mutations
ICGC Data PortalWDR64 
TCGA Data PortalWDR64 
Broad Tumor PortalWDR64
OASIS PortalWDR64 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWDR64  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWDR64
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WDR64
DgiDB (Drug Gene Interaction Database)WDR64
DoCM (Curated mutations)WDR64 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDR64 (select a term)
intoGenWDR64
Cancer3DWDR64(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWDR64
Genetic Testing Registry WDR64
NextProtB1ANS9 [Medical]
TSGene128025
GENETestsWDR64
Huge Navigator WDR64 [HugePedia]
snp3D : Map Gene to Disease128025
BioCentury BCIQWDR64
ClinGenWDR64
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD128025
Chemical/Pharm GKB GenePA142670597
Clinical trialWDR64
Miscellaneous
canSAR (ICR)WDR64 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDR64
EVEXWDR64
GoPubMedWDR64
iHOPWDR64
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:01:33 CEST 2017

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