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WDR73 (WD repeat domain 73)

Identity

Alias_symbol (synonym)FLJ14888
HSPC264
Other aliasGAMOS
HGNC (Hugo) WDR73
LocusID (NCBI) 84942
Atlas_Id 56338
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 84641495 and ends at 84654343 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZSCAN2 (15q25.2) / WDR73 (15q25.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDR73   25928
Cards
Entrez_Gene (NCBI)WDR73  84942  WD repeat domain 73
AliasesGAMOS; HSPC264
GeneCards (Weizmann)WDR73
Ensembl hg19 (Hinxton)ENSG00000177082 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177082 [Gene_View]  chr15:84641495-84654343 [Contig_View]  WDR73 [Vega]
ICGC DataPortalENSG00000177082
TCGA cBioPortalWDR73
AceView (NCBI)WDR73
Genatlas (Paris)WDR73
WikiGenes84942
SOURCE (Princeton)WDR73
Genetics Home Reference (NIH)WDR73
Genomic and cartography
GoldenPath hg38 (UCSC)WDR73  -     chr15:84641495-84654343 -  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WDR73  -     15q25.2   [Description]    (hg19-Feb_2009)
EnsemblWDR73 - 15q25.2 [CytoView hg19]  WDR73 - 15q25.2 [CytoView hg38]
Mapping of homologs : NCBIWDR73 [Mapview hg19]  WDR73 [Mapview hg38]
OMIM251300   616144   
Gene and transcription
Genbank (Entrez)AF161382 AK027200 AK027794 AK055578 AK055729
RefSeq transcript (Entrez)NM_032856
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WDR73
Cluster EST : UnigeneHs.745027 [ NCBI ]
CGAP (NCI)Hs.745027
Alternative Splicing GalleryENSG00000177082
Gene ExpressionWDR73 [ NCBI-GEO ]   WDR73 [ EBI - ARRAY_EXPRESS ]   WDR73 [ SEEK ]   WDR73 [ MEM ]
Gene Expression Viewer (FireBrowse)WDR73 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84942
GTEX Portal (Tissue expression)WDR73
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P4I2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P4I2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P4I2
Splice isoforms : SwissVarQ6P4I2
PhosPhoSitePlusQ6P4I2
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)WDR73
DMDM Disease mutations84942
Blocks (Seattle)WDR73
SuperfamilyQ6P4I2
Human Protein AtlasENSG00000177082
Peptide AtlasQ6P4I2
HPRD08608
IPIIPI00873040   IPI00911114   IPI00180704   IPI00386196   
Protein Interaction databases
DIP (DOE-UCLA)Q6P4I2
IntAct (EBI)Q6P4I2
FunCoupENSG00000177082
BioGRIDWDR73
STRING (EMBL)WDR73
ZODIACWDR73
Ontologies - Pathways
QuickGOQ6P4I2
Ontology : AmiGOspindle pole  cytosol  cleavage furrow  
Ontology : EGO-EBIspindle pole  cytosol  cleavage furrow  
NDEx NetworkWDR73
Atlas of Cancer Signalling NetworkWDR73
Wikipedia pathwaysWDR73
Orthology - Evolution
OrthoDB84942
GeneTree (enSembl)ENSG00000177082
Phylogenetic Trees/Animal Genes : TreeFamWDR73
HOVERGENQ6P4I2
HOGENOMQ6P4I2
Homologs : HomoloGeneWDR73
Homology/Alignments : Family Browser (UCSC)WDR73
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDR73 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDR73
dbVarWDR73
ClinVarWDR73
1000_GenomesWDR73 
Exome Variant ServerWDR73
ExAC (Exome Aggregation Consortium)WDR73 (select the gene name)
Genetic variants : HAPMAP84942
Genomic Variants (DGV)WDR73 [DGVbeta]
DECIPHERWDR73 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWDR73 
Mutations
ICGC Data PortalWDR73 
TCGA Data PortalWDR73 
Broad Tumor PortalWDR73
OASIS PortalWDR73 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWDR73  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWDR73
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WDR73
DgiDB (Drug Gene Interaction Database)WDR73
DoCM (Curated mutations)WDR73 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDR73 (select a term)
intoGenWDR73
Cancer3DWDR73(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM251300    616144   
Orphanet1984    11581   
MedgenWDR73
Genetic Testing Registry WDR73
NextProtQ6P4I2 [Medical]
TSGene84942
GENETestsWDR73
Huge Navigator WDR73 [HugePedia]
snp3D : Map Gene to Disease84942
BioCentury BCIQWDR73
ClinGenWDR73
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84942
Chemical/Pharm GKB GenePA142670588
Clinical trialWDR73
Miscellaneous
canSAR (ICR)WDR73 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDR73
EVEXWDR73
GoPubMedWDR73
iHOPWDR73
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:44:07 CEST 2017

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