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WDR86 (WD repeat domain 86)

Identity

Other alias-
HGNC (Hugo) WDR86
LocusID (NCBI) 349136
Atlas_Id 75735
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 151078207 and ends at 151107124 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDR86   28020
Cards
Entrez_Gene (NCBI)WDR86  349136  WD repeat domain 86
Aliases
GeneCards (Weizmann)WDR86
Ensembl hg19 (Hinxton)ENSG00000187260 [Gene_View]  chr7:151078207-151107124 [Contig_View]  WDR86 [Vega]
Ensembl hg38 (Hinxton)ENSG00000187260 [Gene_View]  chr7:151078207-151107124 [Contig_View]  WDR86 [Vega]
ICGC DataPortalENSG00000187260
TCGA cBioPortalWDR86
AceView (NCBI)WDR86
Genatlas (Paris)WDR86
WikiGenes349136
SOURCE (Princeton)WDR86
Genetics Home Reference (NIH)WDR86
Genomic and cartography
GoldenPath hg19 (UCSC)WDR86  -     chr7:151078207-151107124 -  7q36.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)WDR86  -     7q36.1   [Description]    (hg38-Dec_2013)
EnsemblWDR86 - 7q36.1 [CytoView hg19]  WDR86 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIWDR86 [Mapview hg19]  WDR86 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096225 AK125347 AK296049 AK301628 BC047921
RefSeq transcript (Entrez)NM_001284260 NM_001284261 NM_001284262 NM_198285
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)WDR86
Cluster EST : UnigeneHs.659458 [ NCBI ]
CGAP (NCI)Hs.659458
Alternative Splicing GalleryENSG00000187260
Gene ExpressionWDR86 [ NCBI-GEO ]   WDR86 [ EBI - ARRAY_EXPRESS ]   WDR86 [ SEEK ]   WDR86 [ MEM ]
Gene Expression Viewer (FireBrowse)WDR86 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)349136
GTEX Portal (Tissue expression)WDR86
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86TI4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86TI4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86TI4
Splice isoforms : SwissVarQ86TI4
PhosPhoSitePlusQ86TI4
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)G-protein_beta_WD-40_rep    PQQ_beta_propeller_repeat    Quinonprotein_ADH-like_supfam    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)PQQ (SM00564)  WD40 (SM00320)  
Conserved Domain (NCBI)WDR86
DMDM Disease mutations349136
Blocks (Seattle)WDR86
SuperfamilyQ86TI4
Human Protein AtlasENSG00000187260
Peptide AtlasQ86TI4
HPRD14183
IPIIPI00328560   IPI00412332   IPI00935465   IPI00909637   IPI00953173   
Protein Interaction databases
DIP (DOE-UCLA)Q86TI4
IntAct (EBI)Q86TI4
FunCoupENSG00000187260
BioGRIDWDR86
STRING (EMBL)WDR86
ZODIACWDR86
Ontologies - Pathways
QuickGOQ86TI4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkWDR86
Atlas of Cancer Signalling NetworkWDR86
Wikipedia pathwaysWDR86
Orthology - Evolution
OrthoDB349136
GeneTree (enSembl)ENSG00000187260
Phylogenetic Trees/Animal Genes : TreeFamWDR86
HOVERGENQ86TI4
HOGENOMQ86TI4
Homologs : HomoloGeneWDR86
Homology/Alignments : Family Browser (UCSC)WDR86
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDR86 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDR86
dbVarWDR86
ClinVarWDR86
1000_GenomesWDR86 
Exome Variant ServerWDR86
ExAC (Exome Aggregation Consortium)WDR86 (select the gene name)
Genetic variants : HAPMAP349136
Genomic Variants (DGV)WDR86 [DGVbeta]
DECIPHER (Syndromes)7:151078207-151107124  ENSG00000187260
CONAN: Copy Number AnalysisWDR86 
Mutations
ICGC Data PortalWDR86 
TCGA Data PortalWDR86 
Broad Tumor PortalWDR86
OASIS PortalWDR86 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWDR86  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWDR86
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WDR86
DgiDB (Drug Gene Interaction Database)WDR86
DoCM (Curated mutations)WDR86 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDR86 (select a term)
intoGenWDR86
Cancer3DWDR86(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWDR86
Genetic Testing Registry WDR86
NextProtQ86TI4 [Medical]
TSGene349136
GENETestsWDR86
Huge Navigator WDR86 [HugePedia]
snp3D : Map Gene to Disease349136
BioCentury BCIQWDR86
ClinGenWDR86
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD349136
Chemical/Pharm GKB GenePA145147619
Clinical trialWDR86
Miscellaneous
canSAR (ICR)WDR86 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDR86
EVEXWDR86
GoPubMedWDR86
iHOPWDR86
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:51:40 CET 2017

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