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WDR91 (WD repeat domain 91)

Identity

Alias_symbol (synonym)HSPC049
SORF-1
Other aliasSORF1
HGNC (Hugo) WDR91
LocusID (NCBI) 29062
Atlas_Id 75741
Location 7q33  [Link to chromosome band 7q33]
Location_base_pair Starts at 135183838 and ends at 135211564 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACBD6 (1q25.2) / WDR91 (7q33)FAM83A (8q24.13) / WDR91 (7q33)NUP205 (7q33) / WDR91 (7q33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDR91   24997
Cards
Entrez_Gene (NCBI)WDR91  29062  WD repeat domain 91
AliasesHSPC049; SORF-1; SORF1
GeneCards (Weizmann)WDR91
Ensembl hg19 (Hinxton)ENSG00000105875 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105875 [Gene_View]  chr7:135183838-135211564 [Contig_View]  WDR91 [Vega]
ICGC DataPortalENSG00000105875
TCGA cBioPortalWDR91
AceView (NCBI)WDR91
Genatlas (Paris)WDR91
WikiGenes29062
SOURCE (Princeton)WDR91
Genetics Home Reference (NIH)WDR91
Genomic and cartography
GoldenPath hg38 (UCSC)WDR91  -     chr7:135183838-135211564 -  7q33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WDR91  -     7q33   [Description]    (hg19-Feb_2009)
EnsemblWDR91 - 7q33 [CytoView hg19]  WDR91 - 7q33 [CytoView hg38]
Mapping of homologs : NCBIWDR91 [Mapview hg19]  WDR91 [Mapview hg38]
OMIM616303   
Gene and transcription
Genbank (Entrez)AF161534 AK001606 AK022935 AK074466 AK124765
RefSeq transcript (Entrez)NM_014149
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WDR91
Cluster EST : UnigeneHs.459858 [ NCBI ]
CGAP (NCI)Hs.459858
Alternative Splicing GalleryENSG00000105875
Gene ExpressionWDR91 [ NCBI-GEO ]   WDR91 [ EBI - ARRAY_EXPRESS ]   WDR91 [ SEEK ]   WDR91 [ MEM ]
Gene Expression Viewer (FireBrowse)WDR91 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29062
GTEX Portal (Tissue expression)WDR91
Protein : pattern, domain, 3D structure
UniProt/SwissProtA4D1P6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA4D1P6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA4D1P6
Splice isoforms : SwissVarA4D1P6
PhosPhoSitePlusA4D1P6
Domaine pattern : Prosite (Expaxy)WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)WDR91
DMDM Disease mutations29062
Blocks (Seattle)WDR91
SuperfamilyA4D1P6
Human Protein AtlasENSG00000105875
Peptide AtlasA4D1P6
HPRD11035
IPIIPI00879760   IPI00302965   IPI00477281   IPI00023026   IPI00924918   
Protein Interaction databases
DIP (DOE-UCLA)A4D1P6
IntAct (EBI)A4D1P6
FunCoupENSG00000105875
BioGRIDWDR91
STRING (EMBL)WDR91
ZODIACWDR91
Ontologies - Pathways
QuickGOA4D1P6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkWDR91
Atlas of Cancer Signalling NetworkWDR91
Wikipedia pathwaysWDR91
Orthology - Evolution
OrthoDB29062
GeneTree (enSembl)ENSG00000105875
Phylogenetic Trees/Animal Genes : TreeFamWDR91
HOVERGENA4D1P6
HOGENOMA4D1P6
Homologs : HomoloGeneWDR91
Homology/Alignments : Family Browser (UCSC)WDR91
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDR91 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDR91
dbVarWDR91
ClinVarWDR91
1000_GenomesWDR91 
Exome Variant ServerWDR91
ExAC (Exome Aggregation Consortium)WDR91 (select the gene name)
Genetic variants : HAPMAP29062
Genomic Variants (DGV)WDR91 [DGVbeta]
DECIPHERWDR91 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWDR91 
Mutations
ICGC Data PortalWDR91 
TCGA Data PortalWDR91 
Broad Tumor PortalWDR91
OASIS PortalWDR91 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWDR91  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWDR91
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WDR91
DgiDB (Drug Gene Interaction Database)WDR91
DoCM (Curated mutations)WDR91 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDR91 (select a term)
intoGenWDR91
Cancer3DWDR91(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616303   
Orphanet
MedgenWDR91
Genetic Testing Registry WDR91
NextProtA4D1P6 [Medical]
TSGene29062
GENETestsWDR91
Target ValidationWDR91
Huge Navigator WDR91 [HugePedia]
snp3D : Map Gene to Disease29062
BioCentury BCIQWDR91
ClinGenWDR91
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29062
Chemical/Pharm GKB GenePA162409166
Clinical trialWDR91
Miscellaneous
canSAR (ICR)WDR91 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDR91
EVEXWDR91
GoPubMedWDR91
iHOPWDR91
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:01 CEST 2017

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