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WDYHV1 (WDYHV motif containing 1)

Identity

Alias_namesC8orf32
chromosome 8 open reading frame 32
Alias_symbol (synonym)FLJ10204
Other alias
HGNC (Hugo) WDYHV1
LocusID (NCBI) 55093
Atlas_Id 75744
Location 8q24.13  [Link to chromosome band 8q24]
Location_base_pair Starts at 123416725 and ends at 123442240 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ATAD2 (8q24.13) / WDYHV1 (8q24.13)EXT1 (8q24.11) / WDYHV1 (8q24.13)WDYHV1 (8q24.13) / CDHR2 (5q35.2)
EXT1 WDYHV1ATAD2 WDYHV1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WDYHV1   25490
Cards
Entrez_Gene (NCBI)WDYHV1  55093  WDYHV motif containing 1
AliasesC8orf32
GeneCards (Weizmann)WDYHV1
Ensembl hg19 (Hinxton)ENSG00000156795 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156795 [Gene_View]  chr8:123416725-123442240 [Contig_View]  WDYHV1 [Vega]
ICGC DataPortalENSG00000156795
TCGA cBioPortalWDYHV1
AceView (NCBI)WDYHV1
Genatlas (Paris)WDYHV1
WikiGenes55093
SOURCE (Princeton)WDYHV1
Genetics Home Reference (NIH)WDYHV1
Genomic and cartography
GoldenPath hg38 (UCSC)WDYHV1  -     chr8:123416725-123442240 +  8q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WDYHV1  -     8q24.13   [Description]    (hg19-Feb_2009)
EnsemblWDYHV1 - 8q24.13 [CytoView hg19]  WDYHV1 - 8q24.13 [CytoView hg38]
Mapping of homologs : NCBIWDYHV1 [Mapview hg19]  WDYHV1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001066 AK225643 AK293492 AL528914 AU119047
RefSeq transcript (Entrez)NM_001283024 NM_001283027 NM_018024
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WDYHV1
Cluster EST : UnigeneHs.18029 [ NCBI ]
CGAP (NCI)Hs.18029
Alternative Splicing GalleryENSG00000156795
Gene ExpressionWDYHV1 [ NCBI-GEO ]   WDYHV1 [ EBI - ARRAY_EXPRESS ]   WDYHV1 [ SEEK ]   WDYHV1 [ MEM ]
Gene Expression Viewer (FireBrowse)WDYHV1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55093
GTEX Portal (Tissue expression)WDYHV1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96HA8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96HA8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96HA8
Splice isoforms : SwissVarQ96HA8
PhosPhoSitePlusQ96HA8
Domains : Interpro (EBI)Prot_N_Gln_amidohydro_ab_roll   
Domain families : Pfam (Sanger)Nt_Gln_amidase (PF09764)   
Domain families : Pfam (NCBI)pfam09764   
Conserved Domain (NCBI)WDYHV1
DMDM Disease mutations55093
Blocks (Seattle)WDYHV1
PDB (SRS)3C9Q    4W79   
PDB (PDBSum)3C9Q    4W79   
PDB (IMB)3C9Q    4W79   
PDB (RSDB)3C9Q    4W79   
Structural Biology KnowledgeBase3C9Q    4W79   
SCOP (Structural Classification of Proteins)3C9Q    4W79   
CATH (Classification of proteins structures)3C9Q    4W79   
SuperfamilyQ96HA8
Human Protein AtlasENSG00000156795
Peptide AtlasQ96HA8
HPRD07653
IPIIPI00329756   IPI00793340   IPI00977420   IPI00974315   IPI00795247   IPI00976196   
Protein Interaction databases
DIP (DOE-UCLA)Q96HA8
IntAct (EBI)Q96HA8
FunCoupENSG00000156795
BioGRIDWDYHV1
STRING (EMBL)WDYHV1
ZODIACWDYHV1
Ontologies - Pathways
QuickGOQ96HA8
Ontology : AmiGOprotein binding  nucleus  cytosol  cellular protein modification process  protein-N-terminal glutamine amidohydrolase activity  
Ontology : EGO-EBIprotein binding  nucleus  cytosol  cellular protein modification process  protein-N-terminal glutamine amidohydrolase activity  
NDEx NetworkWDYHV1
Atlas of Cancer Signalling NetworkWDYHV1
Wikipedia pathwaysWDYHV1
Orthology - Evolution
OrthoDB55093
GeneTree (enSembl)ENSG00000156795
Phylogenetic Trees/Animal Genes : TreeFamWDYHV1
HOVERGENQ96HA8
HOGENOMQ96HA8
Homologs : HomoloGeneWDYHV1
Homology/Alignments : Family Browser (UCSC)WDYHV1
Gene fusions - Rearrangements
Fusion: TCGAEXT1 WDYHV1
Fusion: TCGAATAD2 WDYHV1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWDYHV1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WDYHV1
dbVarWDYHV1
ClinVarWDYHV1
1000_GenomesWDYHV1 
Exome Variant ServerWDYHV1
ExAC (Exome Aggregation Consortium)WDYHV1 (select the gene name)
Genetic variants : HAPMAP55093
Genomic Variants (DGV)WDYHV1 [DGVbeta]
DECIPHERWDYHV1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWDYHV1 
Mutations
ICGC Data PortalWDYHV1 
TCGA Data PortalWDYHV1 
Broad Tumor PortalWDYHV1
OASIS PortalWDYHV1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWDYHV1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWDYHV1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WDYHV1
DgiDB (Drug Gene Interaction Database)WDYHV1
DoCM (Curated mutations)WDYHV1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WDYHV1 (select a term)
intoGenWDYHV1
Cancer3DWDYHV1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWDYHV1
Genetic Testing Registry WDYHV1
NextProtQ96HA8 [Medical]
TSGene55093
GENETestsWDYHV1
Target ValidationWDYHV1
Huge Navigator WDYHV1 [HugePedia]
snp3D : Map Gene to Disease55093
BioCentury BCIQWDYHV1
ClinGenWDYHV1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55093
Chemical/Pharm GKB GenePA164727566
Clinical trialWDYHV1
Miscellaneous
canSAR (ICR)WDYHV1 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWDYHV1
EVEXWDYHV1
GoPubMedWDYHV1
iHOPWDYHV1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:02 CEST 2017

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