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WFDC10B (WAP four-disulfide core domain 10B)

Identity

Alias_symbol (synonym)WAP12
Other alias
HGNC (Hugo) WFDC10B
LocusID (NCBI) 280664
Atlas_Id 75748
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 45684651 and ends at 45705019 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WFDC10B   20479
Cards
Entrez_Gene (NCBI)WFDC10B  280664  WAP four-disulfide core domain 10B
AliasesWAP12
GeneCards (Weizmann)WFDC10B
Ensembl hg19 (Hinxton)ENSG00000182931 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182931 [Gene_View]  chr20:45684651-45705019 [Contig_View]  WFDC10B [Vega]
ICGC DataPortalENSG00000182931
TCGA cBioPortalWFDC10B
AceView (NCBI)WFDC10B
Genatlas (Paris)WFDC10B
WikiGenes280664
SOURCE (Princeton)WFDC10B
Genetics Home Reference (NIH)WFDC10B
Genomic and cartography
GoldenPath hg38 (UCSC)WFDC10B  -     chr20:45684651-45705019 -  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WFDC10B  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblWFDC10B - 20q13.12 [CytoView hg19]  WFDC10B - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBIWFDC10B [Mapview hg19]  WFDC10B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF454506 AF454507 BC121071 BC121072
RefSeq transcript (Entrez)NM_172006 NM_172131
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WFDC10B
Cluster EST : UnigeneHs.237392 [ NCBI ]
CGAP (NCI)Hs.237392
Alternative Splicing GalleryENSG00000182931
Gene ExpressionWFDC10B [ NCBI-GEO ]   WFDC10B [ EBI - ARRAY_EXPRESS ]   WFDC10B [ SEEK ]   WFDC10B [ MEM ]
Gene Expression Viewer (FireBrowse)WFDC10B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)280664
GTEX Portal (Tissue expression)WFDC10B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IUB3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IUB3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IUB3
Splice isoforms : SwissVarQ8IUB3
PhosPhoSitePlusQ8IUB3
Domaine pattern : Prosite (Expaxy)WAP (PS51390)   
Domains : Interpro (EBI)WAP_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)WFDC10B
DMDM Disease mutations280664
Blocks (Seattle)WFDC10B
SuperfamilyQ8IUB3
Human Protein AtlasENSG00000182931
Peptide AtlasQ8IUB3
HPRD15672
IPIIPI00216707   IPI00216706   
Protein Interaction databases
DIP (DOE-UCLA)Q8IUB3
IntAct (EBI)Q8IUB3
FunCoupENSG00000182931
BioGRIDWFDC10B
STRING (EMBL)WFDC10B
ZODIACWFDC10B
Ontologies - Pathways
QuickGOQ8IUB3
Ontology : AmiGOextracellular region  negative regulation of peptidase activity  peptidase inhibitor activity  
Ontology : EGO-EBIextracellular region  negative regulation of peptidase activity  peptidase inhibitor activity  
NDEx NetworkWFDC10B
Atlas of Cancer Signalling NetworkWFDC10B
Wikipedia pathwaysWFDC10B
Orthology - Evolution
OrthoDB280664
GeneTree (enSembl)ENSG00000182931
Phylogenetic Trees/Animal Genes : TreeFamWFDC10B
HOVERGENQ8IUB3
HOGENOMQ8IUB3
Homologs : HomoloGeneWFDC10B
Homology/Alignments : Family Browser (UCSC)WFDC10B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWFDC10B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WFDC10B
dbVarWFDC10B
ClinVarWFDC10B
1000_GenomesWFDC10B 
Exome Variant ServerWFDC10B
ExAC (Exome Aggregation Consortium)WFDC10B (select the gene name)
Genetic variants : HAPMAP280664
Genomic Variants (DGV)WFDC10B [DGVbeta]
DECIPHERWFDC10B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWFDC10B 
Mutations
ICGC Data PortalWFDC10B 
TCGA Data PortalWFDC10B 
Broad Tumor PortalWFDC10B
OASIS PortalWFDC10B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWFDC10B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWFDC10B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WFDC10B
DgiDB (Drug Gene Interaction Database)WFDC10B
DoCM (Curated mutations)WFDC10B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WFDC10B (select a term)
intoGenWFDC10B
Cancer3DWFDC10B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWFDC10B
Genetic Testing Registry WFDC10B
NextProtQ8IUB3 [Medical]
TSGene280664
GENETestsWFDC10B
Target ValidationWFDC10B
Huge Navigator WFDC10B [HugePedia]
snp3D : Map Gene to Disease280664
BioCentury BCIQWFDC10B
ClinGenWFDC10B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD280664
Chemical/Pharm GKB GenePA134935020
Clinical trialWFDC10B
Miscellaneous
canSAR (ICR)WFDC10B (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWFDC10B
EVEXWFDC10B
GoPubMedWFDC10B
iHOPWFDC10B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:43:51 CEST 2017

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