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WIPF1 (WAS/WASL interacting protein family member 1)

Identity

Alias_namesWASPIP
Wiskott-Aldrich syndrome protein interacting protein
WAS/WASL interacting protein family, member 1
Alias_symbol (synonym)WIP
Other aliasPRPL-2
WAS2
HGNC (Hugo) WIPF1
LocusID (NCBI) 7456
Atlas_Id 51113
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 174559574 and ends at 174634579 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GORASP2 (2q31.1) / WIPF1 (2q31.1)NASP (1p34.1) / WIPF1 (2q31.1)GORASP2 2q31.1 / WIPF1 2q31.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]

Solid Tumors TT_t0102p34q31ID104301 TT_t0202q31q31ID105314


Other Cancer prone implicated (Data extracted from papers in the Atlas) [ 1 ]
  Wiskott-Aldrich Syndrome (WAS)


External links

Nomenclature
HGNC (Hugo)WIPF1   12736
LRG (Locus Reference Genomic)LRG_374
Cards
Entrez_Gene (NCBI)WIPF1  7456  WAS/WASL interacting protein family member 1
AliasesPRPL-2; WAS2; WASPIP; WIP
GeneCards (Weizmann)WIPF1
Ensembl hg19 (Hinxton)ENSG00000115935 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000115935 [Gene_View]  ENSG00000115935 [Sequence]  chr2:174559574-174634579 [Contig_View]  WIPF1 [Vega]
ICGC DataPortalENSG00000115935
TCGA cBioPortalWIPF1
AceView (NCBI)WIPF1
Genatlas (Paris)WIPF1
WikiGenes7456
SOURCE (Princeton)WIPF1
Genetics Home Reference (NIH)WIPF1
Genomic and cartography
GoldenPath hg38 (UCSC)WIPF1  -     chr2:174559574-174634579 -  2q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WIPF1  -     2q31.1   [Description]    (hg19-Feb_2009)
GoldenPathWIPF1 - 2q31.1 [CytoView hg19]  WIPF1 - 2q31.1 [CytoView hg38]
ImmunoBaseENSG00000115935
Mapping of homologs : NCBIWIPF1 [Mapview hg19]  WIPF1 [Mapview hg38]
OMIM602357   614493   
Gene and transcription
Genbank (Entrez)AA599214 AA903457 AF031588 AF106062 AK097901
RefSeq transcript (Entrez)NM_001077269 NM_001375832 NM_001375833 NM_001375834 NM_001375835 NM_001375836 NM_001375837 NM_001375838 NM_001375839 NM_003387
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WIPF1
Alternative Splicing GalleryENSG00000115935
Gene ExpressionWIPF1 [ NCBI-GEO ]   WIPF1 [ EBI - ARRAY_EXPRESS ]   WIPF1 [ SEEK ]   WIPF1 [ MEM ]
Gene Expression Viewer (FireBrowse)WIPF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7456
GTEX Portal (Tissue expression)WIPF1
Human Protein AtlasENSG00000115935-WIPF1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)WIPF1
DMDM Disease mutations7456
Blocks (Seattle)WIPF1
Human Protein Atlas [tissue]ENSG00000115935-WIPF1 [tissue]
HPRD03835
IPIIPI00418328   IPI00797331   IPI00552369   IPI00952673   IPI00965636   IPI00952741   IPI00917534   IPI00915845   IPI00916236   
Protein Interaction databases
FunCoupENSG00000115935
BioGRIDWIPF1
STRING (EMBL)WIPF1
ZODIACWIPF1
Ontologies - Pathways
Huge Navigator WIPF1 [HugePedia]
snp3D : Map Gene to Disease7456
BioCentury BCIQWIPF1
ClinGenWIPF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7456
Chemical/Pharm GKB GenePA162409189
Clinical trialWIPF1
Miscellaneous
canSAR (ICR)WIPF1 (select the gene name)
DataMed IndexWIPF1
Probes
Litterature
PubMed69 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWIPF1
EVEXWIPF1
GoPubMedWIPF1
iHOPWIPF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:16:38 CET 2020

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