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WNT8B (Wnt family member 8B)

Identity

Other names-
HGNC (Hugo) WNT8B
LocusID (NCBI) 7479
Atlas_Id 42831
Location 10q24.31  [Link to chromosome band 10q24]
Location_base_pair Starts at 102222812 and ends at 102243399 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WNT8B   12789
Cards
Entrez_Gene (NCBI)WNT8B  7479  Wnt family member 8B
Aliases
GeneCards (Weizmann)WNT8B
Ensembl hg19 (Hinxton)ENSG00000075290 [Gene_View]  chr10:102222812-102243399 [Contig_View]  WNT8B [Vega]
Ensembl hg38 (Hinxton)ENSG00000075290 [Gene_View]  chr10:102222812-102243399 [Contig_View]  WNT8B [Vega]
ICGC DataPortalENSG00000075290
TCGA cBioPortalWNT8B
AceView (NCBI)WNT8B
Genatlas (Paris)WNT8B
WikiGenes7479
SOURCE (Princeton)WNT8B
Genomic and cartography
GoldenPath hg19 (UCSC)WNT8B  -     chr10:102222812-102243399 +  10q24.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)WNT8B  -     10q24.31   [Description]    (hg38-Dec_2013)
EnsemblWNT8B - 10q24.31 [CytoView hg19]  WNT8B - 10q24.31 [CytoView hg38]
Mapping of homologs : NCBIWNT8B [Mapview hg19]  WNT8B [Mapview hg38]
OMIM601396   
Gene and transcription
Genbank (Entrez)AB073637 BC156632 CN276452 X91940 Y11094
RefSeq transcript (Entrez)NM_003393
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)WNT8B
Cluster EST : UnigeneHs.421281 [ NCBI ]
CGAP (NCI)Hs.421281
Alternative Splicing GalleryENSG00000075290
Gene ExpressionWNT8B [ NCBI-GEO ]   WNT8B [ EBI - ARRAY_EXPRESS ]   WNT8B [ SEEK ]   WNT8B [ MEM ]
Gene Expression Viewer (FireBrowse)WNT8B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7479
GTEX Portal (Tissue expression)WNT8B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ93098 (Uniprot)
NextProtQ93098  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ93098
Splice isoforms : SwissVarQ93098 (Swissvar)
PhosPhoSitePlusQ93098
Domaine pattern : Prosite (Expaxy)WNT1 (PS00246)   
Domains : Interpro (EBI)Wnt    Wnt8    Wnt_CS   
Domain families : Pfam (Sanger)wnt (PF00110)   
Domain families : Pfam (NCBI)pfam00110   
Domain families : Smart (EMBL)WNT1 (SM00097)  
DMDM Disease mutations7479
Blocks (Seattle)WNT8B
SuperfamilyQ93098
Human Protein AtlasENSG00000075290
Peptide AtlasQ93098
HPRD03235
IPIIPI00004125   
Protein Interaction databases
DIP (DOE-UCLA)Q93098
IntAct (EBI)Q93098
FunCoupENSG00000075290
BioGRIDWNT8B
STRING (EMBL)WNT8B
ZODIACWNT8B
Ontologies - Pathways
QuickGOQ93098
Ontology : AmiGOfrizzled binding  extracellular region  proteinaceous extracellular matrix  extracellular space  signal transduction  gastrulation  nervous system development  Wnt signaling pathway  Wnt signaling pathway  neuron differentiation  neuron differentiation  response to estradiol  response to retinoic acid  cell fate commitment  determination of dorsal identity  cellular response to retinoic acid  beta-catenin destruction complex disassembly  
Ontology : EGO-EBIfrizzled binding  extracellular region  proteinaceous extracellular matrix  extracellular space  signal transduction  gastrulation  nervous system development  Wnt signaling pathway  Wnt signaling pathway  neuron differentiation  neuron differentiation  response to estradiol  response to retinoic acid  cell fate commitment  determination of dorsal identity  cellular response to retinoic acid  beta-catenin destruction complex disassembly  
Pathways : BIOCARTAWnt/LRP6 Signalling [Genes]   
Pathways : KEGGWnt signaling pathway    Hedgehog signaling pathway    Hippo signaling pathway    Melanogenesis    HTLV-I infection    Pathways in cancer    Proteoglycans in cancer    Basal cell carcinoma   
NDEx NetworkWNT8B
Atlas of Cancer Signalling NetworkWNT8B
Wikipedia pathwaysWNT8B
Orthology - Evolution
OrthoDB7479
GeneTree (enSembl)ENSG00000075290
Phylogenetic Trees/Animal Genes : TreeFamWNT8B
Homologs : HomoloGeneWNT8B
Homology/Alignments : Family Browser (UCSC)WNT8B
Gene fusions - Rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerWNT8B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WNT8B
dbVarWNT8B
ClinVarWNT8B
1000_GenomesWNT8B 
Exome Variant ServerWNT8B
ExAC (Exome Aggregation Consortium)WNT8B (select the gene name)
Genetic variants : HAPMAP7479
Genomic Variants (DGV)WNT8B [DGVbeta]
Mutations
ICGC Data PortalWNT8B 
TCGA Data PortalWNT8B 
Broad Tumor PortalWNT8B
OASIS PortalWNT8B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWNT8B 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WNT8B
DgiDB (Drug Gene Interaction Database)WNT8B
DoCM (Curated mutations)WNT8B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WNT8B (select a term)
intoGenWNT8B
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)10:102222812-102243399  ENSG00000075290
CONAN: Copy Number AnalysisWNT8B 
Mutations and Diseases : HGMDWNT8B
OMIM601396   
MedgenWNT8B
Genetic Testing Registry WNT8B
NextProtQ93098 [Medical]
TSGene7479
GENETestsWNT8B
Huge Navigator WNT8B [HugePedia]
snp3D : Map Gene to Disease7479
BioCentury BCIQWNT8B
ClinGenWNT8B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7479
Chemical/Pharm GKB GenePA37390
Clinical trialWNT8B
Miscellaneous
canSAR (ICR)WNT8B (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWNT8B
EVEXWNT8B
GoPubMedWNT8B
iHOPWNT8B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 19 19:19:48 CEST 2016

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