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WT1-AS (WT1 antisense RNA)

Identity

Alias_namesWIT1
Wilms tumor upstream neighbor 1
WT1 antisense RNA (non-protein coding)
Alias_symbol (synonym)WIT-1
WT1AS
WT1-AS1
Other alias
HGNC (Hugo) WT1-AS
LocusID (NCBI) 51352
Atlas_Id 42815
Location 11p13  [Link to chromosome band 11p13]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WT1-AS   18135
Cards
Entrez_Gene (NCBI)WT1-AS  51352  WT1 antisense RNA
AliasesWIT-1; WIT1; WT1-AS1; WT1AS
GeneCards (Weizmann)WT1-AS
Ensembl hg19 (Hinxton)ENSG00000183242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183242 [Gene_View]  - [Contig_View]  WT1-AS [Vega]
ICGC DataPortalENSG00000183242
TCGA cBioPortalWT1-AS
AceView (NCBI)WT1-AS
Genatlas (Paris)WT1-AS
WikiGenes51352
SOURCE (Princeton)WT1-AS
Genetics Home Reference (NIHi/TE>WT1-AS
Genomic and cartography
GoldenPath hg38 (UCSC)WT1-AS  -  
GoldenPath hg19 (UCSC)WT1-AS  -  
EnsemblWT1-AS - [CytoView hg19]  WT1-AS - [CytoView hg38]
Mapping of homologs : NCBIWT1-AS [Mapview hg19]  WT1-AS [Mapview hg38]
OMIM607899   
Gene and transcription
Genbank (Entrez)AW194904 BC002734 BC096708 BC098290 BC100673
RefSeq transcript (Entrez)NM_015855
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WT1-AS
Cluster EST : UnigeneHs.738474 [ NCBI ]
CGAP (NCI)Hs.738474
Alternative Splicing GalleryENSG00000183242
Gene ExpressionWT1-AS [ NCBI-GEO ]   WT1-AS [ EBI - ARRAY_EXPRESS ]   WT1-AS [ SEEK ]   WT1-AS [ MEM ]
Gene Expression Viewer (FireBrowse)WT1-AS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51352
GTEX Portal (Tissue expression)WT1-AS
Human Protein AtlasENSG00000183242-WT1-AS [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ06250   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ06250  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ06250
Splice isoforms : SwissVarQ06250
PhosPhoSitePlusQ06250
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)WT1-AS
DMDM Disease mutations51352
Blocks (Seattle)WT1-AS
SuperfamilyQ06250
Human Protein Atlas [tissue]ENSG00000183242-WT1-AS [tissue]
Peptide AtlasQ06250
HPRD07439
IPIIPI00029678   
Protein Interaction databases
DIP (DOE-UCLA)Q06250
IntAct (EBI)Q06250
FunCoupENSG00000183242
BioGRIDWT1-AS
STRING (EMBL)WT1-AS
ZODIACWT1-AS
Ontologies - Pathways
QuickGOQ06250
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  
NDEx NetworkWT1-AS
Atlas of Cancer Signalling NetworkWT1-AS
Wikipedia pathwaysWT1-AS
Orthology - Evolution
OrthoDB51352
GeneTree (enSembl)ENSG00000183242
Phylogenetic Trees/Animal Genes : TreeFamWT1-AS
HOVERGENQ06250
HOGENOMQ06250
Homologs : HomoloGeneWT1-AS
Homology/Alignments : Family Browser (UCSC)WT1-AS
Gene fusions - Rearrangements
Tumor Fusion PortalWT1-AS
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWT1-AS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WT1-AS
dbVarWT1-AS
ClinVarWT1-AS
1000_GenomesWT1-AS 
Exome Variant ServerWT1-AS
ExAC (Exome Aggregation Consortium)ENSG00000183242
GNOMAD BrowserENSG00000183242
Genetic variants : HAPMAP51352
Genomic Variants (DGV)WT1-AS [DGVbeta]
DECIPHERWT1-AS [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWT1-AS 
Mutations
ICGC Data PortalWT1-AS 
TCGA Data PortalWT1-AS 
Broad Tumor PortalWT1-AS
OASIS PortalWT1-AS [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWT1-AS  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWT1-AS
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WT1-AS
DgiDB (Drug Gene Interaction Database)WT1-AS
DoCM (Curated mutations)WT1-AS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WT1-AS (select a term)
intoGenWT1-AS
Cancer3DWT1-AS(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607899   
Orphanet
DisGeNETWT1-AS
MedgenWT1-AS
Genetic Testing Registry WT1-AS
NextProtQ06250 [Medical]
TSGene51352
GENETestsWT1-AS
Target ValidationWT1-AS
Huge Navigator WT1-AS [HugePedia]
snp3D : Map Gene to Disease51352
BioCentury BCIQWT1-AS
ClinGenWT1-AS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51352
Chemical/Pharm GKB GenePA165543758
Clinical trialWT1-AS
Miscellaneous
canSAR (ICR)WT1-AS (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWT1-AS
EVEXWT1-AS
GoPubMedWT1-AS
iHOPWT1-AS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 14:41:47 CET 2017

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