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WWC2-AS2 (WWC2 antisense RNA 2)

Identity

Alias_namesC4orf38
chromosome 4 open reading frame 38
WWC2 antisense RNA 2 (non-protein coding)
Alias_symbol (synonym)FLJ30277
Other alias
HGNC (Hugo) WWC2-AS2
LocusID (NCBI) 152641
Atlas_Id 75773
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 183097021 and ends at 183099199 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WWC2-AS2   26390
Cards
Entrez_Gene (NCBI)WWC2-AS2  152641  WWC2 antisense RNA 2
AliasesC4orf38
GeneCards (Weizmann)WWC2-AS2
Ensembl hg19 (Hinxton)ENSG00000251359 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251359 [Gene_View]  chr4:183097021-183099199 [Contig_View]  WWC2-AS2 [Vega]
ICGC DataPortalENSG00000251359
TCGA cBioPortalWWC2-AS2
AceView (NCBI)WWC2-AS2
Genatlas (Paris)WWC2-AS2
WikiGenes152641
SOURCE (Princeton)WWC2-AS2
Genetics Home Reference (NIH)WWC2-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)WWC2-AS2  -     chr4:183097021-183099199 -  4q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WWC2-AS2  -     4q35.1   [Description]    (hg19-Feb_2009)
EnsemblWWC2-AS2 - 4q35.1 [CytoView hg19]  WWC2-AS2 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBIWWC2-AS2 [Mapview hg19]  WWC2-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK054839 BC126477 BC126479
RefSeq transcript (Entrez)NM_153008
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WWC2-AS2
Cluster EST : UnigeneHs.745108 [ NCBI ]
CGAP (NCI)Hs.745108
Alternative Splicing GalleryENSG00000251359
Gene ExpressionWWC2-AS2 [ NCBI-GEO ]   WWC2-AS2 [ EBI - ARRAY_EXPRESS ]   WWC2-AS2 [ SEEK ]   WWC2-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)WWC2-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)152641
GTEX Portal (Tissue expression)WWC2-AS2
Human Protein AtlasENSG00000251359-WWC2-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96NR7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96NR7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96NR7
Splice isoforms : SwissVarQ96NR7
PhosPhoSitePlusQ96NR7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)WWC2-AS2
DMDM Disease mutations152641
Blocks (Seattle)WWC2-AS2
SuperfamilyQ96NR7
Human Protein Atlas [tissue]ENSG00000251359-WWC2-AS2 [tissue]
Peptide AtlasQ96NR7
HPRD08082
IPIIPI00043835   
Protein Interaction databases
DIP (DOE-UCLA)Q96NR7
IntAct (EBI)Q96NR7
FunCoupENSG00000251359
BioGRIDWWC2-AS2
STRING (EMBL)WWC2-AS2
ZODIACWWC2-AS2
Ontologies - Pathways
QuickGOQ96NR7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkWWC2-AS2
Atlas of Cancer Signalling NetworkWWC2-AS2
Wikipedia pathwaysWWC2-AS2
Orthology - Evolution
OrthoDB152641
GeneTree (enSembl)ENSG00000251359
Phylogenetic Trees/Animal Genes : TreeFamWWC2-AS2
HOVERGENQ96NR7
HOGENOMQ96NR7
Homologs : HomoloGeneWWC2-AS2
Homology/Alignments : Family Browser (UCSC)WWC2-AS2
Gene fusions - Rearrangements
Tumor Fusion PortalWWC2-AS2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWWC2-AS2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WWC2-AS2
dbVarWWC2-AS2
ClinVarWWC2-AS2
1000_GenomesWWC2-AS2 
Exome Variant ServerWWC2-AS2
ExAC (Exome Aggregation Consortium)ENSG00000251359
GNOMAD BrowserENSG00000251359
Genetic variants : HAPMAP152641
Genomic Variants (DGV)WWC2-AS2 [DGVbeta]
DECIPHERWWC2-AS2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWWC2-AS2 
Mutations
ICGC Data PortalWWC2-AS2 
TCGA Data PortalWWC2-AS2 
Broad Tumor PortalWWC2-AS2
OASIS PortalWWC2-AS2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDWWC2-AS2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WWC2-AS2
DgiDB (Drug Gene Interaction Database)WWC2-AS2
DoCM (Curated mutations)WWC2-AS2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WWC2-AS2 (select a term)
intoGenWWC2-AS2
Cancer3DWWC2-AS2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETWWC2-AS2
MedgenWWC2-AS2
Genetic Testing Registry WWC2-AS2
NextProtQ96NR7 [Medical]
TSGene152641
GENETestsWWC2-AS2
Target ValidationWWC2-AS2
Huge Navigator WWC2-AS2 [HugePedia]
snp3D : Map Gene to Disease152641
BioCentury BCIQWWC2-AS2
ClinGenWWC2-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD152641
Chemical/Pharm GKB GenePA162379826
Clinical trialWWC2-AS2
Miscellaneous
canSAR (ICR)WWC2-AS2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWWC2-AS2
EVEXWWC2-AS2
GoPubMedWWC2-AS2
iHOPWWC2-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:21:51 CET 2017

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