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WWC2 (WW and C2 domain containing 2)

Identity

Alias_namesWW
Alias_symbol (synonym)BOMB
FLJ22029
Other alias
HGNC (Hugo) WWC2
LocusID (NCBI) 80014
Atlas_Id 825
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 184020463 and ends at 184241929 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
WWC2 (4q35.1) / TENM3 (4q34.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WWC2   24148
Cards
Entrez_Gene (NCBI)WWC2  80014  WW and C2 domain containing 2
AliasesBOMB
GeneCards (Weizmann)WWC2
Ensembl hg19 (Hinxton)ENSG00000151718 [Gene_View]  chr4:184020463-184241929 [Contig_View]  WWC2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000151718 [Gene_View]  chr4:184020463-184241929 [Contig_View]  WWC2 [Vega]
ICGC DataPortalENSG00000151718
TCGA cBioPortalWWC2
AceView (NCBI)WWC2
Genatlas (Paris)WWC2
WikiGenes80014
SOURCE (Princeton)WWC2
Genetics Home Reference (NIH)WWC2
Genomic and cartography
GoldenPath hg19 (UCSC)WWC2  -     chr4:184020463-184241929 +  4q35.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)WWC2  -     4q35.1   [Description]    (hg38-Dec_2013)
EnsemblWWC2 - 4q35.1 [CytoView hg19]  WWC2 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBIWWC2 [Mapview hg19]  WWC2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ566366 AK025682 AK074260 AK091401 AK126057
RefSeq transcript (Entrez)NM_024949
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)WWC2
Cluster EST : UnigeneHs.333179 [ NCBI ]
CGAP (NCI)Hs.333179
Alternative Splicing GalleryENSG00000151718
Gene ExpressionWWC2 [ NCBI-GEO ]   WWC2 [ EBI - ARRAY_EXPRESS ]   WWC2 [ SEEK ]   WWC2 [ MEM ]
Gene Expression Viewer (FireBrowse)WWC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80014
GTEX Portal (Tissue expression)WWC2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6AWC2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6AWC2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6AWC2
Splice isoforms : SwissVarQ6AWC2
PhosPhoSitePlusQ6AWC2
Domaine pattern : Prosite (Expaxy)WW_DOMAIN_1 (PS01159)    WW_DOMAIN_2 (PS50020)   
Domains : Interpro (EBI)C2_dom    WW_dom   
Domain families : Pfam (Sanger)WW (PF00397)   
Domain families : Pfam (NCBI)pfam00397   
Domain families : Smart (EMBL)WW (SM00456)  
Conserved Domain (NCBI)WWC2
DMDM Disease mutations80014
Blocks (Seattle)WWC2
SuperfamilyQ6AWC2
Human Protein AtlasENSG00000151718
Peptide AtlasQ6AWC2
HPRD12529
IPIIPI00550853   IPI00873525   IPI00871775   IPI00873602   IPI00445212   IPI00873117   IPI00874129   IPI00895779   IPI00879366   IPI00968241   
Protein Interaction databases
DIP (DOE-UCLA)Q6AWC2
IntAct (EBI)Q6AWC2
FunCoupENSG00000151718
BioGRIDWWC2
STRING (EMBL)WWC2
ZODIACWWC2
Ontologies - Pathways
QuickGOQ6AWC2
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  cytosol  kinase binding  protein complex scaffold  negative regulation of hippo signaling  negative regulation of organ growth  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  cytosol  kinase binding  protein complex scaffold  negative regulation of hippo signaling  negative regulation of organ growth  
NDEx NetworkWWC2
Atlas of Cancer Signalling NetworkWWC2
Wikipedia pathwaysWWC2
Orthology - Evolution
OrthoDB80014
GeneTree (enSembl)ENSG00000151718
Phylogenetic Trees/Animal Genes : TreeFamWWC2
HOVERGENQ6AWC2
HOGENOMQ6AWC2
Homologs : HomoloGeneWWC2
Homology/Alignments : Family Browser (UCSC)WWC2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWWC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WWC2
dbVarWWC2
ClinVarWWC2
1000_GenomesWWC2 
Exome Variant ServerWWC2
ExAC (Exome Aggregation Consortium)WWC2 (select the gene name)
Genetic variants : HAPMAP80014
Genomic Variants (DGV)WWC2 [DGVbeta]
DECIPHER (Syndromes)4:184020463-184241929  ENSG00000151718
CONAN: Copy Number AnalysisWWC2 
Mutations
ICGC Data PortalWWC2 
TCGA Data PortalWWC2 
Broad Tumor PortalWWC2
OASIS PortalWWC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWWC2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWWC2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch WWC2
DgiDB (Drug Gene Interaction Database)WWC2
DoCM (Curated mutations)WWC2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WWC2 (select a term)
intoGenWWC2
Cancer3DWWC2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWWC2
Genetic Testing Registry WWC2
NextProtQ6AWC2 [Medical]
TSGene80014
GENETestsWWC2
Huge Navigator WWC2 [HugePedia]
snp3D : Map Gene to Disease80014
BioCentury BCIQWWC2
ClinGenWWC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80014
Chemical/Pharm GKB GenePA143485671
Clinical trialWWC2
Miscellaneous
canSAR (ICR)WWC2 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWWC2
EVEXWWC2
GoPubMedWWC2
iHOPWWC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:34:22 CET 2017

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