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WWC3 (WWC family member 3)

Identity

Alias_symbol (synonym)KIAA1280
BM042
Other alias
HGNC (Hugo) WWC3
LocusID (NCBI) 55841
Atlas_Id 75774
Location Xp22.2  [Link to chromosome band Xp22]
Location_base_pair Starts at 10015755 and ends at 10144478 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CTSC (11q14.2) / WWC3 (Xp22.2)DCUN1D1 (3q26.33) / WWC3 (Xp22.2)TRPS1 (8q23.3) / WWC3 (Xp22.2)
WWC3 (Xp22.2) / CLEC18A (16q22.1)WWC3 (Xp22.2) / PRR13 (12q13.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)WWC3   29237
Cards
Entrez_Gene (NCBI)WWC3  55841  WWC family member 3
AliasesBM042
GeneCards (Weizmann)WWC3
Ensembl hg19 (Hinxton)ENSG00000047644 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000047644 [Gene_View]  chrX:10015755-10144478 [Contig_View]  WWC3 [Vega]
ICGC DataPortalENSG00000047644
TCGA cBioPortalWWC3
AceView (NCBI)WWC3
Genatlas (Paris)WWC3
WikiGenes55841
SOURCE (Princeton)WWC3
Genetics Home Reference (NIH)WWC3
Genomic and cartography
GoldenPath hg38 (UCSC)WWC3  -     chrX:10015755-10144478 +  Xp22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)WWC3  -     Xp22.2   [Description]    (hg19-Feb_2009)
EnsemblWWC3 - Xp22.2 [CytoView hg19]  WWC3 - Xp22.2 [CytoView hg38]
Mapping of homologs : NCBIWWC3 [Mapview hg19]  WWC3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA401229 AB033106 AI130747 AI306162 AK024683
RefSeq transcript (Entrez)NM_015691
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)WWC3
Cluster EST : UnigeneHs.527524 [ NCBI ]
CGAP (NCI)Hs.527524
Alternative Splicing GalleryENSG00000047644
Gene ExpressionWWC3 [ NCBI-GEO ]   WWC3 [ EBI - ARRAY_EXPRESS ]   WWC3 [ SEEK ]   WWC3 [ MEM ]
Gene Expression Viewer (FireBrowse)WWC3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55841
GTEX Portal (Tissue expression)WWC3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULE0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULE0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULE0
Splice isoforms : SwissVarQ9ULE0
PhosPhoSitePlusQ9ULE0
Domains : Interpro (EBI)C2_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)WWC3
DMDM Disease mutations55841
Blocks (Seattle)WWC3
SuperfamilyQ9ULE0
Human Protein AtlasENSG00000047644
Peptide AtlasQ9ULE0
HPRD11136
IPIIPI00395925   IPI00871732   IPI01014898   IPI01015319   
Protein Interaction databases
DIP (DOE-UCLA)Q9ULE0
IntAct (EBI)Q9ULE0
FunCoupENSG00000047644
BioGRIDWWC3
STRING (EMBL)WWC3
ZODIACWWC3
Ontologies - Pathways
QuickGOQ9ULE0
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  cytosol  kinase binding  protein complex scaffold  negative regulation of hippo signaling  negative regulation of organ growth  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  cytosol  kinase binding  protein complex scaffold  negative regulation of hippo signaling  negative regulation of organ growth  
NDEx NetworkWWC3
Atlas of Cancer Signalling NetworkWWC3
Wikipedia pathwaysWWC3
Orthology - Evolution
OrthoDB55841
GeneTree (enSembl)ENSG00000047644
Phylogenetic Trees/Animal Genes : TreeFamWWC3
HOVERGENQ9ULE0
HOGENOMQ9ULE0
Homologs : HomoloGeneWWC3
Homology/Alignments : Family Browser (UCSC)WWC3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerWWC3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)WWC3
dbVarWWC3
ClinVarWWC3
1000_GenomesWWC3 
Exome Variant ServerWWC3
ExAC (Exome Aggregation Consortium)WWC3 (select the gene name)
Genetic variants : HAPMAP55841
Genomic Variants (DGV)WWC3 [DGVbeta]
DECIPHERWWC3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisWWC3 
Mutations
ICGC Data PortalWWC3 
TCGA Data PortalWWC3 
Broad Tumor PortalWWC3
OASIS PortalWWC3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICWWC3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDWWC3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch WWC3
DgiDB (Drug Gene Interaction Database)WWC3
DoCM (Curated mutations)WWC3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)WWC3 (select a term)
intoGenWWC3
Cancer3DWWC3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenWWC3
Genetic Testing Registry WWC3
NextProtQ9ULE0 [Medical]
TSGene55841
GENETestsWWC3
Target ValidationWWC3
Huge Navigator WWC3 [HugePedia]
snp3D : Map Gene to Disease55841
BioCentury BCIQWWC3
ClinGenWWC3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55841
Chemical/Pharm GKB GenePA143485672
Clinical trialWWC3
Miscellaneous
canSAR (ICR)WWC3 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineWWC3
EVEXWWC3
GoPubMedWWC3
iHOPWWC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:09 CEST 2017

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