Atlas of Genetics and Cytogenetics in Oncology and Haematology


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XAGE1D (X antigen family, member 1D)

Identity

Other namesCT12.1
CT12.1D
CTP9
HGNC (Hugo) XAGE1D
LocusID (NCBI) 9503
Location Xp11.22
Location_base_pair Starts at 52238810 and ends at 52243953 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)XAGE1D   21508
Cards
Entrez_Gene (NCBI)XAGE1D  9503  X antigen family, member 1D
GeneCards (Weizmann)XAGE1D
Ensembl (Hinxton)ENSG00000204376 [Gene_View]  chrX:52238810-52243953 [Contig_View]  XAGE1D [Vega]
AceView (NCBI)XAGE1D
Genatlas (Paris)XAGE1D
WikiGenes9503
SOURCE (Princeton)NM_020411 NM_133430 NM_133431
Genomic and cartography
GoldenPath (UCSC)XAGE1D  -  Xp11.22   chrX:52238810-52243953 +  Xp11.22   [Description]    (hg19-Feb_2009)
EnsemblXAGE1D - Xp11.22 [CytoView]
Mapping of homologs : NCBIXAGE1D [Mapview]
OMIM300289   
Gene and transcription
Genbank (Entrez)AF251237 AJ290447 AJ318878 AJ318879 BC009538
RefSeq transcript (Entrez)NM_020411 NM_133430 NM_133431
RefSeq genomic (Entrez)NC_000023 NG_029951 NT_011630
Consensus coding sequences : CCDS (NCBI)XAGE1D
Cluster EST : UnigeneHs.584511 [ NCBI ]
CGAP (NCI)Hs.584511
Alternative Splicing : Fast-db (Paris)GSHG0031548
Alternative Splicing GalleryENSG00000204376
Gene ExpressionXAGE1D [ NCBI-GEO ]     XAGE1D [ SEEK ]   XAGE1D [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HD64 (Uniprot)
NextProtQ9HD64  [Medical]
With graphics : InterProQ9HD64
Splice isoforms : SwissVarQ9HD64 (Swissvar)
Domains : Interpro (EBI)GAGE   
Related proteins : CluSTrQ9HD64
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
DMDM Disease mutations9503
Blocks (Seattle)Q9HD64
Human Protein AtlasENSG00000204376
Peptide AtlasQ9HD64
HPRD02241
Protein Interaction databases
DIP (DOE-UCLA)Q9HD64
IntAct (EBI)Q9HD64
FunCoupENSG00000204376
BioGRIDXAGE1D
InParanoidQ9HD64
Interologous Interaction database Q9HD64
IntegromeDBXAGE1D
STRING (EMBL)XAGE1D
Ontologies - Pathways
Ontology : AmiGO
Ontology : EGO-EBI
REACTOMEXAGE1D
Protein Interaction DatabaseXAGE1D
Wikipedia pathwaysXAGE1D
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)XAGE1D
SNP (GeneSNP Utah)XAGE1D
SNP : HGBaseXAGE1D
Genetic variants : HAPMAPXAGE1D
1000_GenomesXAGE1D 
ICGC programENSG00000204376 
Mutations and Diseases : HGMDXAGE1D
OMIM300289   
GENETestsXAGE1D
Disease Genetic AssociationXAGE1D
Huge Navigator XAGE1D [HugePedia]  XAGE1D [HugeCancerGEM]
Genomic VariantsXAGE1D  XAGE1D [DGVbeta]
Exome VariantXAGE1D
dbVarXAGE1D
ClinVarXAGE1D
snp3D : Map Gene to Disease9503
General knowledge
Homologs : HomoloGeneXAGE1D
Homology/Alignments : Family Browser (UCSC)XAGE1D
Phylogenetic Trees/Animal Genes : TreeFamXAGE1D
Chemical/Protein Interactions : CTD9503
Chemical/Pharm GKB GenePA28526
Clinical trialXAGE1D
Cancer Resource (Charite)ENSG00000204376
Other databases
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
CoreMineXAGE1D
iHOPXAGE1D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 16:49:42 CEST 2014

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