XBP1 (X-box binding protein 1)

Identity

Other names	TREB5
	XBP2
HGNC	XBP1
Location	22q12.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	XBP1   12801
Entrez_Gene	XBP1  7494  X-box binding protein 1
	Cards
GeneCards	XBP1
Ensembl	XBP1 [Search_View]   ENSG00000100219 [Gene_View]
Genatlas	XBP1
GeneLynx	XBP1
eGenome	XBP1
euGene	7494
	Genomic and cartography
GoldenPath	XBP1  -  22q12.1   chr22:27520548-27526560 -  22q12.1   [Description]    (hg18-March_2006)
Ensembl	XBP1 - 22q12.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	XBP1
	Gene and transcription
Genbank	AB076383 [ ENTREZ ]
Genbank	AB076384 [ ENTREZ ]
Genbank	AK093842 [ ENTREZ ]
Genbank	AK292188 [ ENTREZ ]
Genbank	AK313761 [ ENTREZ ]
RefSeq	NM_001079539 [ SRS ]    NM_001079539 [ ENTREZ ]
RefSeq	NM_005080 [ SRS ]    NM_005080 [ ENTREZ ]
RefSeq	AC_000065 [ SRS ]    AC_000065 [ ENTREZ ]
RefSeq	AC_000154 [ SRS ]    AC_000154 [ ENTREZ ]
RefSeq	NC_000022 [ SRS ]    NC_000022 [ ENTREZ ]
RefSeq	NT_011520 [ SRS ]    NT_011520 [ ENTREZ ]
RefSeq	NW_001838745 [ SRS ]    NW_001838745 [ ENTREZ ]
RefSeq	NW_927628 [ SRS ]    NW_927628 [ ENTREZ ]
AceView	XBP1 AceView - NCBI
Unigene	Hs.437638 [ SRS ]    Hs.437638 [ NCBI ]     HS437638 [ spliceNest ]
Fast-db	3471 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P17861 [ SRS]    P17861 [ EXPASY ]     P17861 [ INTERPRO ]     P17861 [ UNIPROT ]
Prosite	PS50217 BZIP [ SRS ]    PS50217 BZIP [ Expasy ]
Prosite	PS00036 BZIP_BASIC [ SRS ]    PS00036 BZIP_BASIC [ Expasy ]
Interpro	IPR011700 bZIP_2 [ SRS ]    IPR011700 bZIP_2 [ EBI ]
Interpro	IPR004827 TF_bZIP [ SRS ]    IPR004827 TF_bZIP [ EBI ]
CluSTr	P17861
Pfam	PF07716 bZIP_2 [ SRS ]    PF07716 bZIP_2 [ Sanger ]    pfam07716 [ NCBI-CDD ]
Smart	SM00338 BRLZ [EMBL]
Blocks	P17861
HPRD	01908
	Protein Interaction databases
DIP	P17861
IntAct	P17861
	Polymorphism : SNP, mutations, diseases
OMIM	125480;194355    [ map ]
GENECLINICS	125480;194355
SNP	XBP1 [dbSNP-NCBI]
SNP	NM_001079539 [SNP-NCI]
SNP	NM_005080 [SNP-NCI]
SNP	XBP1 [GeneSNPs - Utah]  XBP1] [HGBASE - SRS]
HAPMAP	XBP1 [HAPMAP]
COSMIC	XBP1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	XBP1
	General knowledge
Family Browser	XBP1 [UCSC Family Browser]
SOURCE	NM_001079539
SOURCE	NM_005080
SMD	Hs.437638
SAGE	Hs.437638
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	immune response [Amigo]  immune response
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GO	protein dimerization activity [Amigo]  protein dimerization activity
PubGene	XBP1
TreeFam	XBP1
CTD	7494 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	XBP1 Related clones (RZPD - Berlin)
	PubMed
PubMed	59 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:38:26 2008