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XIRP2 (xin actin binding repeat containing 2)

Identity

Alias (NCBI)CMYA3
HGNC (Hugo) XIRP2
HGNC Alias namemyomaxin
HGNC Previous nameCMYA3
HGNC Previous namecardiomyopathy associated 3
LocusID (NCBI) 129446
Atlas_Id 53666
Location 2q24.3  [Link to chromosome band 2q24]
Location_base_pair Starts at 166888480 and ends at 167259751 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SDHD (11q23.1) / XIRP2 (2q24.3)XIRP2 (2q24.3) / XIRP2 (2q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)XIRP2   14303
Cards
Entrez_Gene (NCBI)XIRP2    xin actin binding repeat containing 2
AliasesCMYA3
GeneCards (Weizmann)XIRP2
Ensembl hg19 (Hinxton)ENSG00000163092 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163092 [Gene_View]  ENSG00000163092 [Sequence]  chr2:166888480-167259751 [Contig_View]  XIRP2 [Vega]
ICGC DataPortalENSG00000163092
TCGA cBioPortalXIRP2
AceView (NCBI)XIRP2
Genatlas (Paris)XIRP2
SOURCE (Princeton)XIRP2
Genetics Home Reference (NIH)XIRP2
Genomic and cartography
GoldenPath hg38 (UCSC)XIRP2  -     chr2:166888480-167259751 +  2q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)XIRP2  -     2q24.3   [Description]    (hg19-Feb_2009)
GoldenPathXIRP2 - 2q24.3 [CytoView hg19]  XIRP2 - 2q24.3 [CytoView hg38]
ImmunoBaseENSG00000163092
Genome Data Viewer NCBIXIRP2 [Mapview hg19]  
OMIM609778   
Gene and transcription
Genbank (Entrez)AA665183 AJ626901 AK056582 AK092683 AK096430
RefSeq transcript (Entrez)NM_001079810 NM_001199143 NM_001199144 NM_001199145 NM_152381
Consensus coding sequences : CCDS (NCBI)XIRP2
Gene ExpressionXIRP2 [ NCBI-GEO ]   XIRP2 [ EBI - ARRAY_EXPRESS ]   XIRP2 [ SEEK ]   XIRP2 [ MEM ]
Gene Expression Viewer (FireBrowse)XIRP2 [ Firebrowse - Broad ]
GenevisibleExpression of XIRP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)129446
GTEX Portal (Tissue expression)XIRP2
Human Protein AtlasENSG00000163092-XIRP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)XIRP2
Human Protein Atlas [tissue]ENSG00000163092-XIRP2 [tissue]
HPRD10267
Protein Interaction databases
BioGRIDXIRP2
STRING (EMBL)XIRP2
ZODIACXIRP2
Ontologies - Pathways
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXXIRP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:38:33 CEST 2021

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