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XPO4 (exportin 4)

Identity

Alias_symbol (synonym)FLJ13046
KIAA1721
Other aliasexp4
HGNC (Hugo) XPO4
LocusID (NCBI) 64328
Atlas_Id 52233
Location 13q12.11  [Link to chromosome band 13q12]
Location_base_pair Starts at 20777329 and ends at 20902774 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)XPO4   17796
Cards
Entrez_Gene (NCBI)XPO4  64328  exportin 4
Aliasesexp4
GeneCards (Weizmann)XPO4
Ensembl hg19 (Hinxton)ENSG00000132953 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132953 [Gene_View]  chr13:20777329-20902774 [Contig_View]  XPO4 [Vega]
ICGC DataPortalENSG00000132953
TCGA cBioPortalXPO4
AceView (NCBI)XPO4
Genatlas (Paris)XPO4
WikiGenes64328
SOURCE (Princeton)XPO4
Genetics Home Reference (NIH)XPO4
Genomic and cartography
GoldenPath hg38 (UCSC)XPO4  -     chr13:20777329-20902774 -  13q12.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)XPO4  -     13q12.11   [Description]    (hg19-Feb_2009)
EnsemblXPO4 - 13q12.11 [CytoView hg19]  XPO4 - 13q12.11 [CytoView hg38]
Mapping of homologs : NCBIXPO4 [Mapview hg19]  XPO4 [Mapview hg38]
OMIM611449   
Gene and transcription
Genbank (Entrez)AA418037 AB051508 AK023108 AK057924 AK129848
RefSeq transcript (Entrez)NM_022459
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)XPO4
Cluster EST : UnigeneHs.507452 [ NCBI ]
CGAP (NCI)Hs.507452
Alternative Splicing GalleryENSG00000132953
Gene ExpressionXPO4 [ NCBI-GEO ]   XPO4 [ EBI - ARRAY_EXPRESS ]   XPO4 [ SEEK ]   XPO4 [ MEM ]
Gene Expression Viewer (FireBrowse)XPO4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64328
GTEX Portal (Tissue expression)XPO4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9C0E2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9C0E2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9C0E2
Splice isoforms : SwissVarQ9C0E2
PhosPhoSitePlusQ9C0E2
Domains : Interpro (EBI)ARM-like    ARM-type_fold    CRM1_C_dom   
Domain families : Pfam (Sanger)CRM1_C (PF08767)   
Domain families : Pfam (NCBI)pfam08767   
Conserved Domain (NCBI)XPO4
DMDM Disease mutations64328
Blocks (Seattle)XPO4
SuperfamilyQ9C0E2
Human Protein AtlasENSG00000132953
Peptide AtlasQ9C0E2
HPRD18307
IPIIPI00028357   IPI00909191   IPI00935768   IPI01012297   
Protein Interaction databases
DIP (DOE-UCLA)Q9C0E2
IntAct (EBI)Q9C0E2
FunCoupENSG00000132953
BioGRIDXPO4
STRING (EMBL)XPO4
ZODIACXPO4
Ontologies - Pathways
QuickGOQ9C0E2
Ontology : AmiGOnuclear export signal receptor activity  protein binding  nuclear pore  nucleoplasm  cytoplasm  cytosol  protein export from nucleus  Ran GTPase binding  positive regulation of protein export from nucleus  
Ontology : EGO-EBInuclear export signal receptor activity  protein binding  nuclear pore  nucleoplasm  cytoplasm  cytosol  protein export from nucleus  Ran GTPase binding  positive regulation of protein export from nucleus  
NDEx NetworkXPO4
Atlas of Cancer Signalling NetworkXPO4
Wikipedia pathwaysXPO4
Orthology - Evolution
OrthoDB64328
GeneTree (enSembl)ENSG00000132953
Phylogenetic Trees/Animal Genes : TreeFamXPO4
HOVERGENQ9C0E2
HOGENOMQ9C0E2
Homologs : HomoloGeneXPO4
Homology/Alignments : Family Browser (UCSC)XPO4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerXPO4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)XPO4
dbVarXPO4
ClinVarXPO4
1000_GenomesXPO4 
Exome Variant ServerXPO4
ExAC (Exome Aggregation Consortium)XPO4 (select the gene name)
Genetic variants : HAPMAP64328
Genomic Variants (DGV)XPO4 [DGVbeta]
DECIPHERXPO4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisXPO4 
Mutations
ICGC Data PortalXPO4 
TCGA Data PortalXPO4 
Broad Tumor PortalXPO4
OASIS PortalXPO4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICXPO4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDXPO4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch XPO4
DgiDB (Drug Gene Interaction Database)XPO4
DoCM (Curated mutations)XPO4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)XPO4 (select a term)
intoGenXPO4
Cancer3DXPO4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611449   
Orphanet
MedgenXPO4
Genetic Testing Registry XPO4
NextProtQ9C0E2 [Medical]
TSGene64328
GENETestsXPO4
Huge Navigator XPO4 [HugePedia]
snp3D : Map Gene to Disease64328
BioCentury BCIQXPO4
ClinGenXPO4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64328
Chemical/Pharm GKB GenePA134866468
Clinical trialXPO4
Miscellaneous
canSAR (ICR)XPO4 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineXPO4
EVEXXPO4
GoPubMedXPO4
iHOPXPO4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:44:21 CEST 2017

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