Atlas of Genetics and Cytogenetics in Oncology and Haematology

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XPO4 (exportin 4)

Identity

Other namesexp4
HGNC (Hugo) XPO4
LocusID (NCBI) 64328
Location 13q12.11
Location_base_pair Starts at 21351468 and ends at 21476913 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)XPO4   17796
Entrez_Gene (NCBI)XPO4  64328  exportin 4
Cards
GeneCards (Weizmann)XPO4
Ensembl (Hinxton)ENSG00000132953 [Gene_View]  chr13:21351468-21476913 [Contig_View]  XPO4 [Vega]
AceView (NCBI)XPO4
Genatlas (Paris)XPO4
SOURCE (Stanford)NM_022459
Genomic and cartography
GoldenPath (UCSC)XPO4  -  13q12.11   chr13:21351468-21476913 -  13q12.11   [Description]    (hg19-Feb_2009)
EnsemblXPO4 - 13q12.11 [CytoView]
Mapping of homologs : NCBIXPO4 [Mapview]
OMIM611449   
Gene and transcription
Genbank (Entrez)AA418037 AB051508 AK023108 AK057924 AK129848
RefSeq transcript (SRS)NM_022459
RefSeq transcript (Entrez)NM_022459
RefSeq genomic (SRS)AC_000145 NC_000013 NC_018924 NT_024524 NW_001838069 NW_004078077
RefSeq genomic (Entrez)AC_000145 NC_000013 NC_018924 NT_024524 NW_001838069 NW_004078077
Consensus coding sequences : CCDS (NCBI)XPO4
Cluster EST : UnigeneHs.507452 [ SRS ] Hs.507452 [ NCBI ]
CGAP (NCI)Hs.507452
Alternative Splicing : Fast-db (Paris)GSHG0008343
Alternative Splicing GalleryENSG00000132953
Gene ExpressionXPO4 [ NCBI-GEO ]   XPO4 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9C0E2 (SRS) Q9C0E2 (Uniprot)
NextProtQ9C0E2
With graphics : InterProQ9C0E2
Splice isoforms : SwissVarQ9C0E2(Swissvar)
Domains : Interpro (SRS)ARM-like    ARM-type_fold    CRM1_C_dom   
Domains : Interpro (EBI)ARM-like    ARM-type_fold    CRM1_C_dom   
Related proteins : CluSTrQ9C0E2
Domain families : Pfam (SRS)CRM1_C (PF08767)   
Domain families : Pfam (Sanger)CRM1_C (PF08767)   
Domain families : Pfam (NCBI)pfam08767   
DMDM64328
Blocks (Seattle)Q9C0E2
Human Protein AtlasENSG00000132953
HPRD18307
IPIIPI00028357   IPI00909191   IPI00935768   IPI01012297   
Protein Interaction databases
DIP (DOE-UCLA)Q9C0E2
IntAct (EBI)Q9C0E2
FunCoupENSG00000132953
REACTOMEXPO4
Protein Interaction Database64328
BioGRIDXPO4
InParanoidQ9C0E2
Interologous Interaction database Q9C0E2
IntegromeDBXPO4
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)XPO4
SNP (GeneSNP Utah)XPO4
SNP : HGBaseXPO4
Genetic variants : HAPMAPXPO4
Somatic Mutations in Cancer : COSMICXPO4 
CONAN: Copy Number AnalysisXPO4 
Mutations and Diseases : HGMDXPO4
OMIM611449   
GENETests611449   
Disease Genetic AssociationXPO4
Huge Navigator XPO4 [HugePedia]  XPO4 [HugeCancerGEM]
Genomic VariantsXPO4  XPO4 [DGVbeta]
snp3D : Map Gene to Disease64328
General knowledge
Homologs : HomoloGeneXPO4
Homology/Alignments : Family Browser (UCSC)XPO4
Phylogenetic Trees/Animal Genes : TreeFamXPO4
Chemical/Protein Interactions : CTD64328
Chemical/Pharm GKB GenePA134866468
Clinical trialXPO4
Cancer Resource (Charite)ENSG00000132953
Ontology : AmiGOprotein binding  nucleus  cytoplasm  protein transport  positive regulation of protein export from nucleus  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  protein transport  positive regulation of protein export from nucleus  
Other databases
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
PubGeneXPO4
iHOPXPO4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:20:53 CEST 2013
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