Atlas of Genetics and Cytogenetics in Oncology and Haematology


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XPO7 (exportin 7)

Identity

Alias_namesRANBP16
RAN binding protein 16
Alias_symbol (synonym)KIAA0745
Other aliasEXP7
HGNC (Hugo) XPO7
LocusID (NCBI) 23039
Atlas_Id 55600
Location 8p21.3  [Link to chromosome band 8p21]
Location_base_pair Starts at 21919669 and ends at 22006585 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
XPO7 (8p21.3) / DAB1 (1p32.2)XPO7 (8p21.3) / ETV4 (17q21.31)XPO7 (8p21.3) / XPO7 (8p21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)XPO7   14108
Cards
Entrez_Gene (NCBI)XPO7  23039  exportin 7
AliasesEXP7; RANBP16
GeneCards (Weizmann)XPO7
Ensembl hg19 (Hinxton)ENSG00000130227 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130227 [Gene_View]  chr8:21919669-22006585 [Contig_View]  XPO7 [Vega]
ICGC DataPortalENSG00000130227
TCGA cBioPortalXPO7
AceView (NCBI)XPO7
Genatlas (Paris)XPO7
WikiGenes23039
SOURCE (Princeton)XPO7
Genetics Home Reference (NIH)XPO7
Genomic and cartography
GoldenPath hg38 (UCSC)XPO7  -     chr8:21919669-22006585 +  8p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)XPO7  -     8p21.3   [Description]    (hg19-Feb_2009)
EnsemblXPO7 - 8p21.3 [CytoView hg19]  XPO7 - 8p21.3 [CytoView hg38]
Mapping of homologs : NCBIXPO7 [Mapview hg19]  XPO7 [Mapview hg38]
OMIM606140   
Gene and transcription
Genbank (Entrez)AB018288 AF064729 AK291472 AK299848 AK311616
RefSeq transcript (Entrez)NM_001100161 NM_001100162 NM_015024
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)XPO7
Cluster EST : UnigeneHs.172685 [ NCBI ]
CGAP (NCI)Hs.172685
Alternative Splicing GalleryENSG00000130227
Gene ExpressionXPO7 [ NCBI-GEO ]   XPO7 [ EBI - ARRAY_EXPRESS ]   XPO7 [ SEEK ]   XPO7 [ MEM ]
Gene Expression Viewer (FireBrowse)XPO7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23039
GTEX Portal (Tissue expression)XPO7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UIA9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UIA9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UIA9
Splice isoforms : SwissVarQ9UIA9
PhosPhoSitePlusQ9UIA9
Domaine pattern : Prosite (Expaxy)IMPORTIN_B_NT (PS50166)   
Domains : Interpro (EBI)ARM-type_fold    Importin-beta_N   
Domain families : Pfam (Sanger)IBN_N (PF03810)   
Domain families : Pfam (NCBI)pfam03810   
Domain families : Smart (EMBL)IBN_N (SM00913)  
Conserved Domain (NCBI)XPO7
DMDM Disease mutations23039
Blocks (Seattle)XPO7
SuperfamilyQ9UIA9
Human Protein AtlasENSG00000130227
Peptide AtlasQ9UIA9
HPRD05846
IPIIPI00302458   IPI00855940   IPI00976601   IPI00978640   
Protein Interaction databases
DIP (DOE-UCLA)Q9UIA9
IntAct (EBI)Q9UIA9
FunCoupENSG00000130227
BioGRIDXPO7
STRING (EMBL)XPO7
ZODIACXPO7
Ontologies - Pathways
QuickGOQ9UIA9
Ontology : AmiGOnuclear export signal receptor activity  protein binding  nucleus  nuclear pore  cytoplasm  protein export from nucleus  Ran GTPase binding  mRNA transport  
Ontology : EGO-EBInuclear export signal receptor activity  protein binding  nucleus  nuclear pore  cytoplasm  protein export from nucleus  Ran GTPase binding  mRNA transport  
NDEx NetworkXPO7
Atlas of Cancer Signalling NetworkXPO7
Wikipedia pathwaysXPO7
Orthology - Evolution
OrthoDB23039
GeneTree (enSembl)ENSG00000130227
Phylogenetic Trees/Animal Genes : TreeFamXPO7
HOVERGENQ9UIA9
HOGENOMQ9UIA9
Homologs : HomoloGeneXPO7
Homology/Alignments : Family Browser (UCSC)XPO7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerXPO7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)XPO7
dbVarXPO7
ClinVarXPO7
1000_GenomesXPO7 
Exome Variant ServerXPO7
ExAC (Exome Aggregation Consortium)XPO7 (select the gene name)
Genetic variants : HAPMAP23039
Genomic Variants (DGV)XPO7 [DGVbeta]
DECIPHERXPO7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisXPO7 
Mutations
ICGC Data PortalXPO7 
TCGA Data PortalXPO7 
Broad Tumor PortalXPO7
OASIS PortalXPO7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICXPO7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDXPO7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch XPO7
DgiDB (Drug Gene Interaction Database)XPO7
DoCM (Curated mutations)XPO7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)XPO7 (select a term)
intoGenXPO7
Cancer3DXPO7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606140   
Orphanet
MedgenXPO7
Genetic Testing Registry XPO7
NextProtQ9UIA9 [Medical]
TSGene23039
GENETestsXPO7
Target ValidationXPO7
Huge Navigator XPO7 [HugePedia]
snp3D : Map Gene to Disease23039
BioCentury BCIQXPO7
ClinGenXPO7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23039
Chemical/Pharm GKB GenePA34207
Clinical trialXPO7
Miscellaneous
canSAR (ICR)XPO7 (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineXPO7
EVEXXPO7
GoPubMedXPO7
iHOPXPO7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:03:04 CEST 2017

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