Atlas of Genetics and Cytogenetics in Oncology and Haematology


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YAE1 (YAE1 maturation factor of ABCE1)

Identity

Alias (NCBI)C7orf36
CIAB2
GK003
YAE1D1
HGNC (Hugo) YAE1
LocusID (NCBI) 57002
Atlas_Id 80403
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 39566404 and ends at 39572881 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)YAE1   24857
Cards
Entrez_Gene (NCBI)YAE1    YAE1 maturation factor of ABCE1
AliasesC7orf36; CIAB2; GK003; YAE1D1
GeneCards (Weizmann)YAE1
Ensembl hg19 (Hinxton)ENSG00000241127 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241127 [Gene_View]  ENSG00000241127 [Sequence]  chr7:39566404-39572881 [Contig_View]  YAE1 [Vega]
ICGC DataPortalENSG00000241127
TCGA cBioPortalYAE1
AceView (NCBI)YAE1
Genatlas (Paris)YAE1
SOURCE (Princeton)YAE1
Genetics Home Reference (NIH)YAE1
Genomic and cartography
GoldenPath hg38 (UCSC)YAE1  -     chr7:39566404-39572881 +  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)YAE1  -     7p14.1   [Description]    (hg19-Feb_2009)
GoldenPathYAE1 - 7p14.1 [CytoView hg19]  YAE1 - 7p14.1 [CytoView hg38]
ImmunoBaseENSG00000241127
Genome Data Viewer NCBIYAE1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA157293 AF226046 AK096857 AK293511 AK314937
RefSeq transcript (Entrez)NM_001282446 NM_020192
Consensus coding sequences : CCDS (NCBI)YAE1
Gene ExpressionYAE1 [ NCBI-GEO ]   YAE1 [ EBI - ARRAY_EXPRESS ]   YAE1 [ SEEK ]   YAE1 [ MEM ]
Gene Expression Viewer (FireBrowse)YAE1 [ Firebrowse - Broad ]
GenevisibleExpression of YAE1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57002
GTEX Portal (Tissue expression)YAE1
Human Protein AtlasENSG00000241127-YAE1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRH1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRH1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRH1
PhosPhoSitePlusQ9NRH1
Domains : Interpro (EBI)Essential_protein_Yae1_N    Yae1-like   
Domain families : Pfam (Sanger)Yae1_N (PF09811)   
Domain families : Pfam (NCBI)pfam09811   
Conserved Domain (NCBI)YAE1
SuperfamilyQ9NRH1
AlphaFold pdb e-kbQ9NRH1   
Human Protein Atlas [tissue]ENSG00000241127-YAE1 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9NRH1
IntAct (EBI)Q9NRH1
BioGRIDYAE1
STRING (EMBL)YAE1
ZODIACYAE1
Ontologies - Pathways
QuickGOQ9NRH1
Ontology : AmiGOprotein binding  nucleus  cytoplasm  protein maturation by [4Fe-4S] cluster transfer  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  protein maturation by [4Fe-4S] cluster transfer  
NDEx NetworkYAE1
Atlas of Cancer Signalling NetworkYAE1
Wikipedia pathwaysYAE1
Orthology - Evolution
OrthoDB57002
GeneTree (enSembl)ENSG00000241127
Phylogenetic Trees/Animal Genes : TreeFamYAE1
Homologs : HomoloGeneYAE1
Homology/Alignments : Family Browser (UCSC)YAE1
Gene fusions - Rearrangements
Fusion : QuiverYAE1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerYAE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)YAE1
dbVarYAE1
ClinVarYAE1
MonarchYAE1
1000_GenomesYAE1 
Exome Variant ServerYAE1
GNOMAD BrowserENSG00000241127
Varsome BrowserYAE1
ACMGYAE1 variants
VarityQ9NRH1
Genomic Variants (DGV)YAE1 [DGVbeta]
DECIPHERYAE1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisYAE1 
Mutations
ICGC Data PortalYAE1 
TCGA Data PortalYAE1 
Broad Tumor PortalYAE1
OASIS PortalYAE1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICYAE1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DYAE1
Mutations and Diseases : HGMDYAE1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaYAE1
DgiDB (Drug Gene Interaction Database)YAE1
DoCM (Curated mutations)YAE1
CIViC (Clinical Interpretations of Variants in Cancer)YAE1
Cancer3DYAE1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETYAE1
MedgenYAE1
Genetic Testing Registry YAE1
NextProtQ9NRH1 [Medical]
GENETestsYAE1
Target ValidationYAE1
Huge Navigator YAE1 [HugePedia]
ClinGenYAE1
Clinical trials, drugs, therapy
MyCancerGenomeYAE1
Protein Interactions : CTDYAE1
Pharm GKB GenePA134961882
PharosQ9NRH1
Clinical trialYAE1
Miscellaneous
canSAR (ICR)YAE1
HarmonizomeYAE1
ARCHS4YAE1
DataMed IndexYAE1
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXYAE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:58:43 CET 2022

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