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YPEL2 (yippee like 2)

Identity

Alias (NCBI)FKSG4
HGNC (Hugo) YPEL2
HGNC Alias symbFKSG4
HGNC Previous nameyippee-like 2 (Drosophila)
LocusID (NCBI) 388403
Atlas_Id 75820
Location 17q22  [Link to chromosome band 17q22]
Location_base_pair Starts at 59331655 and ends at 59401729 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MSI2 (17q22) / YPEL2 (17q22)PDE7A (8q13.1) / YPEL2 (17q22)SKAP1 (17q21.32) / YPEL2 (17q22)
YPEL2 (17q22) / HEATR6 (17q23.1)YPEL2 (17q22) / HSPA12B (20p13)YPEL2 (17q22) / SDF2 (17q11.2)
YPEL2 (17q22) / UBE2Z (17q21.32)YPEL2 (17q22) / YPEL2 (17q22)ZNF148 (3q21.2) / YPEL2 (17q22)
YPEL2 SDF2YPEL2 UBE2ZYPEL2 HSPA12B
YPEL2 HEATR6ZNF148 YPEL2MSI2 YPEL2
SKAP1 YPEL2PDE7A YPEL2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)YPEL2   18326
Cards
Entrez_Gene (NCBI)YPEL2    yippee like 2
AliasesFKSG4
GeneCards (Weizmann)YPEL2
Ensembl hg19 (Hinxton)ENSG00000175155 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175155 [Gene_View]  ENSG00000175155 [Sequence]  chr17:59331655-59401729 [Contig_View]  YPEL2 [Vega]
ICGC DataPortalENSG00000175155
TCGA cBioPortalYPEL2
AceView (NCBI)YPEL2
Genatlas (Paris)YPEL2
SOURCE (Princeton)YPEL2
Genetics Home Reference (NIH)YPEL2
Genomic and cartography
GoldenPath hg38 (UCSC)YPEL2  -     chr17:59331655-59401729 +  17q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)YPEL2  -     17q22   [Description]    (hg19-Feb_2009)
GoldenPathYPEL2 - 17q22 [CytoView hg19]  YPEL2 - 17q22 [CytoView hg38]
ImmunoBaseENSG00000175155
Genome Data Viewer NCBIYPEL2 [Mapview hg19]  
OMIM609723   
Gene and transcription
Genbank (Entrez)AA604677 AB098736 AF305195 AI540782 AK096866
RefSeq transcript (Entrez)NM_001005404
Consensus coding sequences : CCDS (NCBI)YPEL2
Gene ExpressionYPEL2 [ NCBI-GEO ]   YPEL2 [ EBI - ARRAY_EXPRESS ]   YPEL2 [ SEEK ]   YPEL2 [ MEM ]
Gene Expression Viewer (FireBrowse)YPEL2 [ Firebrowse - Broad ]
GenevisibleExpression of YPEL2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388403
GTEX Portal (Tissue expression)YPEL2
Human Protein AtlasENSG00000175155-YPEL2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96QA6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96QA6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96QA6
PhosPhoSitePlusQ96QA6
Domaine pattern : Prosite (Expaxy)YIPPEE (PS51792)   
Domains : Interpro (EBI)Yippee    Yippee/Mis18/Cereblon    Yippee_fam   
Domain families : Pfam (Sanger)Yippee-Mis18 (PF03226)   
Domain families : Pfam (NCBI)pfam03226   
Conserved Domain (NCBI)YPEL2
SuperfamilyQ96QA6
AlphaFold pdb e-kbQ96QA6   
Human Protein Atlas [tissue]ENSG00000175155-YPEL2 [tissue]
HPRD15682
Protein Interaction databases
DIP (DOE-UCLA)Q96QA6
IntAct (EBI)Q96QA6
BioGRIDYPEL2
STRING (EMBL)YPEL2
ZODIACYPEL2
Ontologies - Pathways
QuickGOQ96QA6
Ontology : AmiGOprotein binding  nucleolus  metal ion binding  
Ontology : EGO-EBIprotein binding  nucleolus  metal ion binding  
NDEx NetworkYPEL2
Atlas of Cancer Signalling NetworkYPEL2
Wikipedia pathwaysYPEL2
Orthology - Evolution
OrthoDB388403
GeneTree (enSembl)ENSG00000175155
Phylogenetic Trees/Animal Genes : TreeFamYPEL2
Homologs : HomoloGeneYPEL2
Homology/Alignments : Family Browser (UCSC)YPEL2
Gene fusions - Rearrangements
Fusion : QuiverYPEL2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerYPEL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)YPEL2
dbVarYPEL2
ClinVarYPEL2
MonarchYPEL2
1000_GenomesYPEL2 
Exome Variant ServerYPEL2
GNOMAD BrowserENSG00000175155
Varsome BrowserYPEL2
ACMGYPEL2 variants
VarityQ96QA6
Genomic Variants (DGV)YPEL2 [DGVbeta]
DECIPHERYPEL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisYPEL2 
Mutations
ICGC Data PortalYPEL2 
TCGA Data PortalYPEL2 
Broad Tumor PortalYPEL2
OASIS PortalYPEL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICYPEL2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DYPEL2
Mutations and Diseases : HGMDYPEL2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaYPEL2
DgiDB (Drug Gene Interaction Database)YPEL2
DoCM (Curated mutations)YPEL2
CIViC (Clinical Interpretations of Variants in Cancer)YPEL2
Cancer3DYPEL2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609723   
Orphanet
DisGeNETYPEL2
MedgenYPEL2
Genetic Testing Registry YPEL2
NextProtQ96QA6 [Medical]
GENETestsYPEL2
Target ValidationYPEL2
Huge Navigator YPEL2 [HugePedia]
ClinGenYPEL2
Clinical trials, drugs, therapy
MyCancerGenomeYPEL2
Protein Interactions : CTDYPEL2
Pharm GKB GenePA134978522
PharosQ96QA6
Clinical trialYPEL2
Miscellaneous
canSAR (ICR)YPEL2
HarmonizomeYPEL2
DataMed IndexYPEL2
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXYPEL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:28:45 CEST 2021

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