YTHDF3 (YTH N6-methyladenosine RNA binding protein 3)

2014-11-01 Affiliation

Identity

HGNC

YTHDF3

LOCATION

8q12.3

LOCUSID

253943

ALIAS

DF3

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 253943
MIM: 618669
HGNC: 26465
Ensembl: ENSG00000185728

Variants:

dbSNP: 253943
ClinVar: 253943
TCGA: ENSG00000185728
COSMIC: YTHDF3

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000185728	ENST00000517371	S4R373
ENSG00000185728	ENST00000539294	Q7Z739
ENSG00000185728	ENST00000612880	A0A087WWB0
ENSG00000185728	ENST00000613853	A0A087X0U5
ENSG00000185728	ENST00000615676	A0A087X0C3
ENSG00000185728	ENST00000617200	A0A024R7W5
ENSG00000185728	ENST00000617952	A0A087WU40
ENSG00000185728	ENST00000619337	A0A087WU63
ENSG00000185728	ENST00000621413	A0A087WY31
ENSG00000185728	ENST00000621820	A0A087WY31
ENSG00000185728	ENST00000621890	A0A024R7W5
ENSG00000185728	ENST00000621957	A0A087X0Q1
ENSG00000185728	ENST00000623280	A0A024R7W5

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
27371828	2016	N(6)-methyladenosine of HIV-1 RNA regulates viral infection and HIV-1 Gag protein expression.	76
30866959	2019	m⁶A RNA modification and its writer/reader VIRMA/YTHDF3 in testicular germ cell tumors: a role in seminoma phenotype maintenance.	11
20463905	2010	Concomitant duplications of opioid peptide and receptor genes before the origin of jawed vertebrates.	0
28106072	2017	YTHDF3 facilitates translation and decay of N⁶-methyladenosine-modified RNA.	0

Citation

Dessen P

YTHDF3 (YTH N6-methyladenosine RNA binding protein 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75824/ythdf3