Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ZAR1L (zygote arrest 1 like)

Identity

Alias (NCBI)Z3CXXC7
ZAR2
HGNC (Hugo) ZAR1L
HGNC Alias symbZ3CXXC7
HGNC Alias namezinc finger, 3CxxC-type 7
LocusID (NCBI) 646799
Atlas_Id 75833
Location 13q13.1  [Link to chromosome band 13q13]
Location_base_pair Starts at 32303771 and ends at 32311954 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ZAR1L   37116
Cards
Entrez_Gene (NCBI)ZAR1L    zygote arrest 1 like
AliasesZ3CXXC7; ZAR2
GeneCards (Weizmann)ZAR1L
Ensembl hg19 (Hinxton)ENSG00000189167 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189167 [Gene_View]  ENSG00000189167 [Sequence]  chr13:32303771-32311954 [Contig_View]  ZAR1L [Vega]
ICGC DataPortalENSG00000189167
TCGA cBioPortalZAR1L
AceView (NCBI)ZAR1L
Genatlas (Paris)ZAR1L
SOURCE (Princeton)ZAR1L
Genetics Home Reference (NIH)ZAR1L
Genomic and cartography
GoldenPath hg38 (UCSC)ZAR1L  -     chr13:32303771-32311954 -  13q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZAR1L  -     13q13.1   [Description]    (hg19-Feb_2009)
GoldenPathZAR1L - 13q13.1 [CytoView hg19]  ZAR1L - 13q13.1 [CytoView hg38]
ImmunoBaseENSG00000189167
genome Data Viewer NCBIZAR1L [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC146956 BC146965 DB457084 DB522524
RefSeq transcript (Entrez)NM_001136571
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZAR1L
Alternative Splicing GalleryENSG00000189167
Gene ExpressionZAR1L [ NCBI-GEO ]   ZAR1L [ EBI - ARRAY_EXPRESS ]   ZAR1L [ SEEK ]   ZAR1L [ MEM ]
Gene Expression Viewer (FireBrowse)ZAR1L [ Firebrowse - Broad ]
GenevisibleExpression of ZAR1L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646799
GTEX Portal (Tissue expression)ZAR1L
Human Protein AtlasENSG00000189167-ZAR1L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NP61   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NP61  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NP61
Splice isoforms : SwissVarA6NP61
PhosPhoSitePlusA6NP61
Domains : Interpro (EBI)Zar1    Znf-3CxxC   
Domain families : Pfam (Sanger)zf-3CxxC (PF13695)   
Domain families : Pfam (NCBI)pfam13695   
Domain families : Smart (EMBL)zf-3CxxC (SM01328)  
Conserved Domain (NCBI)ZAR1L
Blocks (Seattle)ZAR1L
SuperfamilyA6NP61
Human Protein Atlas [tissue]ENSG00000189167-ZAR1L [tissue]
Peptide AtlasA6NP61
IPIIPI00414408   IPI00981897   
Protein Interaction databases
DIP (DOE-UCLA)A6NP61
IntAct (EBI)A6NP61
BioGRIDZAR1L
STRING (EMBL)ZAR1L
ZODIACZAR1L
Ontologies - Pathways
QuickGOA6NP61
Ontology : AmiGOcytoplasm  
Ontology : EGO-EBIcytoplasm  
NDEx NetworkZAR1L
Atlas of Cancer Signalling NetworkZAR1L
Wikipedia pathwaysZAR1L
Orthology - Evolution
OrthoDB646799
GeneTree (enSembl)ENSG00000189167
Phylogenetic Trees/Animal Genes : TreeFamZAR1L
HOGENOMA6NP61
Homologs : HomoloGeneZAR1L
Homology/Alignments : Family Browser (UCSC)ZAR1L
Gene fusions - Rearrangements
Fusion : QuiverZAR1L
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZAR1L [hg38]
dbVarZAR1L
ClinVarZAR1L
MonarchZAR1L
1000_GenomesZAR1L 
Exome Variant ServerZAR1L
GNOMAD BrowserENSG00000189167
Varsome BrowserZAR1L
Genomic Variants (DGV)ZAR1L [DGVbeta]
DECIPHERZAR1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZAR1L 
Mutations
ICGC Data PortalZAR1L 
TCGA Data PortalZAR1L 
Broad Tumor PortalZAR1L
OASIS PortalZAR1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZAR1L  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZAR1L
Mutations and Diseases : HGMDZAR1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZAR1L
DgiDB (Drug Gene Interaction Database)ZAR1L
DoCM (Curated mutations)ZAR1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZAR1L (select a term)
intoGenZAR1L
Cancer3DZAR1L(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZAR1L
MedgenZAR1L
Genetic Testing Registry ZAR1L
NextProtA6NP61 [Medical]
GENETestsZAR1L
Target ValidationZAR1L
Huge Navigator ZAR1L [HugePedia]
ClinGenZAR1L
Clinical trials, drugs, therapy
MyCancerGenomeZAR1L
Protein Interactions : CTD
Pharm GKB GenePA165505636
Clinical trialZAR1L
Miscellaneous
canSAR (ICR)ZAR1L (select the gene name)
HarmonizomeZAR1L
DataMed IndexZAR1L
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZAR1L
EVEXZAR1L
GoPubMedZAR1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:35:08 CET 2020
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