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ZBBX (zinc finger, B-box domain containing)

Identity

Alias_symbol (synonym)FLJ23049
Other alias-
HGNC (Hugo) ZBBX
LocusID (NCBI) 79740
Atlas_Id 75835
Location 3q26.1  [Link to chromosome band 3q26]
Location_base_pair Starts at 166958077 and ends at 167098085 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BDH1 (3q29) / ZBBX (3q26.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBBX   26245
Cards
Entrez_Gene (NCBI)ZBBX  79740  zinc finger, B-box domain containing
Aliases
GeneCards (Weizmann)ZBBX
Ensembl hg19 (Hinxton)ENSG00000169064 [Gene_View]  chr3:166958077-167098085 [Contig_View]  ZBBX [Vega]
Ensembl hg38 (Hinxton)ENSG00000169064 [Gene_View]  chr3:166958077-167098085 [Contig_View]  ZBBX [Vega]
ICGC DataPortalENSG00000169064
TCGA cBioPortalZBBX
AceView (NCBI)ZBBX
Genatlas (Paris)ZBBX
WikiGenes79740
SOURCE (Princeton)ZBBX
Genetics Home Reference (NIH)ZBBX
Genomic and cartography
GoldenPath hg19 (UCSC)ZBBX  -     chr3:166958077-167098085 -  3q26.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZBBX  -     3q26.1   [Description]    (hg38-Dec_2013)
EnsemblZBBX - 3q26.1 [CytoView hg19]  ZBBX - 3q26.1 [CytoView hg38]
Mapping of homologs : NCBIZBBX [Mapview hg19]  ZBBX [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026702 AK093296 BC034229 BC144444 CB321707
RefSeq transcript (Entrez)NM_001199201 NM_001199202 NM_024687
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)ZBBX
Cluster EST : UnigeneHs.478143 [ NCBI ]
CGAP (NCI)Hs.478143
Alternative Splicing GalleryENSG00000169064
Gene ExpressionZBBX [ NCBI-GEO ]   ZBBX [ EBI - ARRAY_EXPRESS ]   ZBBX [ SEEK ]   ZBBX [ MEM ]
Gene Expression Viewer (FireBrowse)ZBBX [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79740
GTEX Portal (Tissue expression)ZBBX
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MT70   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MT70  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MT70
Splice isoforms : SwissVarA8MT70
PhosPhoSitePlusA8MT70
Domains : Interpro (EBI)Znf_B-box   
Domain families : Pfam (Sanger)zf-B_box (PF00643)   
Domain families : Pfam (NCBI)pfam00643   
Conserved Domain (NCBI)ZBBX
DMDM Disease mutations79740
Blocks (Seattle)ZBBX
SuperfamilyA8MT70
Human Protein AtlasENSG00000169064
Peptide AtlasA8MT70
HPRD08015
IPIIPI00002975   IPI00796568   IPI00797846   IPI00946132   IPI00946588   IPI00945857   IPI00945677   IPI00946510   
Protein Interaction databases
DIP (DOE-UCLA)A8MT70
IntAct (EBI)A8MT70
FunCoupENSG00000169064
BioGRIDZBBX
STRING (EMBL)ZBBX
ZODIACZBBX
Ontologies - Pathways
QuickGOA8MT70
Ontology : AmiGOintracellular  zinc ion binding  
Ontology : EGO-EBIintracellular  zinc ion binding  
NDEx NetworkZBBX
Atlas of Cancer Signalling NetworkZBBX
Wikipedia pathwaysZBBX
Orthology - Evolution
OrthoDB79740
GeneTree (enSembl)ENSG00000169064
Phylogenetic Trees/Animal Genes : TreeFamZBBX
HOVERGENA8MT70
HOGENOMA8MT70
Homologs : HomoloGeneZBBX
Homology/Alignments : Family Browser (UCSC)ZBBX
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBBX [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBBX
dbVarZBBX
ClinVarZBBX
1000_GenomesZBBX 
Exome Variant ServerZBBX
ExAC (Exome Aggregation Consortium)ZBBX (select the gene name)
Genetic variants : HAPMAP79740
Genomic Variants (DGV)ZBBX [DGVbeta]
DECIPHER (Syndromes)3:166958077-167098085  ENSG00000169064
CONAN: Copy Number AnalysisZBBX 
Mutations
ICGC Data PortalZBBX 
TCGA Data PortalZBBX 
Broad Tumor PortalZBBX
OASIS PortalZBBX [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBBX  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBBX
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBBX
DgiDB (Drug Gene Interaction Database)ZBBX
DoCM (Curated mutations)ZBBX (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBBX (select a term)
intoGenZBBX
Cancer3DZBBX(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZBBX
Genetic Testing Registry ZBBX
NextProtA8MT70 [Medical]
TSGene79740
GENETestsZBBX
Huge Navigator ZBBX [HugePedia]
snp3D : Map Gene to Disease79740
BioCentury BCIQZBBX
ClinGenZBBX
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79740
Chemical/Pharm GKB GenePA162409400
Clinical trialZBBX
Miscellaneous
canSAR (ICR)ZBBX (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBBX
EVEXZBBX
GoPubMedZBBX
iHOPZBBX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:01 CET 2017

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