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ZBTB11 (zinc finger and BTB domain containing 11)

Identity

Alias_symbol (synonym)ZNF-U69274
ZNF913
Other alias
HGNC (Hugo) ZBTB11
LocusID (NCBI) 27107
Atlas_Id 75847
Location 3q12.3  [Link to chromosome band 3q12]
Location_base_pair Starts at 101368283 and ends at 101395988 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
TFG (3q12.2) / ZBTB11 (3q12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB11   16740
Cards
Entrez_Gene (NCBI)ZBTB11  27107  zinc finger and BTB domain containing 11
AliasesZNF-U69274; ZNF913
GeneCards (Weizmann)ZBTB11
Ensembl hg19 (Hinxton)ENSG00000066422 [Gene_View]  chr3:101368283-101395988 [Contig_View]  ZBTB11 [Vega]
Ensembl hg38 (Hinxton)ENSG00000066422 [Gene_View]  chr3:101368283-101395988 [Contig_View]  ZBTB11 [Vega]
ICGC DataPortalENSG00000066422
TCGA cBioPortalZBTB11
AceView (NCBI)ZBTB11
Genatlas (Paris)ZBTB11
WikiGenes27107
SOURCE (Princeton)ZBTB11
Genetics Home Reference (NIH)ZBTB11
Genomic and cartography
GoldenPath hg19 (UCSC)ZBTB11  -     chr3:101368283-101395988 -  3q12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZBTB11  -     3q12.3   [Description]    (hg38-Dec_2013)
EnsemblZBTB11 - 3q12.3 [CytoView hg19]  ZBTB11 - 3q12.3 [CytoView hg38]
Mapping of homologs : NCBIZBTB11 [Mapview hg19]  ZBTB11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB208862 AI636025 AK023488 AK312859 BC028062
RefSeq transcript (Entrez)NM_014415
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)ZBTB11
Cluster EST : UnigeneHs.743292 [ NCBI ]
CGAP (NCI)Hs.743292
Alternative Splicing GalleryENSG00000066422
Gene ExpressionZBTB11 [ NCBI-GEO ]   ZBTB11 [ EBI - ARRAY_EXPRESS ]   ZBTB11 [ SEEK ]   ZBTB11 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27107
GTEX Portal (Tissue expression)ZBTB11
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95625   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95625  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95625
Splice isoforms : SwissVarO95625
PhosPhoSitePlusO95625
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00651    pfam00096   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB11
DMDM Disease mutations27107
Blocks (Seattle)ZBTB11
SuperfamilyO95625
Human Protein AtlasENSG00000066422
Peptide AtlasO95625
HPRD15690
IPIIPI00004337   IPI00793310   
Protein Interaction databases
DIP (DOE-UCLA)O95625
IntAct (EBI)O95625
FunCoupENSG00000066422
BioGRIDZBTB11
STRING (EMBL)ZBTB11
ZODIACZBTB11
Ontologies - Pathways
QuickGOO95625
Ontology : AmiGOmolecular_function  DNA binding  nucleoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  
Ontology : EGO-EBImolecular_function  DNA binding  nucleoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  
NDEx NetworkZBTB11
Atlas of Cancer Signalling NetworkZBTB11
Wikipedia pathwaysZBTB11
Orthology - Evolution
OrthoDB27107
GeneTree (enSembl)ENSG00000066422
Phylogenetic Trees/Animal Genes : TreeFamZBTB11
HOVERGENO95625
HOGENOMO95625
Homologs : HomoloGeneZBTB11
Homology/Alignments : Family Browser (UCSC)ZBTB11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB11
dbVarZBTB11
ClinVarZBTB11
1000_GenomesZBTB11 
Exome Variant ServerZBTB11
ExAC (Exome Aggregation Consortium)ZBTB11 (select the gene name)
Genetic variants : HAPMAP27107
Genomic Variants (DGV)ZBTB11 [DGVbeta]
DECIPHER (Syndromes)3:101368283-101395988  ENSG00000066422
CONAN: Copy Number AnalysisZBTB11 
Mutations
ICGC Data PortalZBTB11 
TCGA Data PortalZBTB11 
Broad Tumor PortalZBTB11
OASIS PortalZBTB11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB11
DgiDB (Drug Gene Interaction Database)ZBTB11
DoCM (Curated mutations)ZBTB11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB11 (select a term)
intoGenZBTB11
Cancer3DZBTB11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZBTB11
Genetic Testing Registry ZBTB11
NextProtO95625 [Medical]
TSGene27107
GENETestsZBTB11
Huge Navigator ZBTB11 [HugePedia]
snp3D : Map Gene to Disease27107
BioCentury BCIQZBTB11
ClinGenZBTB11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27107
Chemical/Pharm GKB GenePA134907354
Clinical trialZBTB11
Miscellaneous
canSAR (ICR)ZBTB11 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB11
EVEXZBTB11
GoPubMedZBTB11
iHOPZBTB11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:03 CET 2017

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