Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZBTB14 (zinc finger and BTB domain containing 14)

Identity

Alias_namesZFP161
zinc finger protein 161 homolog (mouse)
zinc finger protein 161
ZFP161 zinc finger protein
Alias_symbol (synonym)ZNF478
Other aliasZF5
ZFP-161
ZFP-5
HGNC (Hugo) ZBTB14
LocusID (NCBI) 7541
Atlas_Id 75849
Location 18p11.31  [Link to chromosome band 18p11]
Location_base_pair Starts at 5289018 and ends at 5296194 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB14   12860
Cards
Entrez_Gene (NCBI)ZBTB14  7541  zinc finger and BTB domain containing 14
AliasesZF5; ZFP-161; ZFP-5; ZFP161; 
ZNF478
GeneCards (Weizmann)ZBTB14
Ensembl hg19 (Hinxton)ENSG00000198081 [Gene_View]  chr18:5289018-5296194 [Contig_View]  ZBTB14 [Vega]
Ensembl hg38 (Hinxton)ENSG00000198081 [Gene_View]  chr18:5289018-5296194 [Contig_View]  ZBTB14 [Vega]
ICGC DataPortalENSG00000198081
TCGA cBioPortalZBTB14
AceView (NCBI)ZBTB14
Genatlas (Paris)ZBTB14
WikiGenes7541
SOURCE (Princeton)ZBTB14
Genetics Home Reference (NIH)ZBTB14
Genomic and cartography
GoldenPath hg19 (UCSC)ZBTB14  -     chr18:5289018-5296194 -  18p11.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZBTB14  -     18p11.31   [Description]    (hg38-Dec_2013)
EnsemblZBTB14 - 18p11.31 [CytoView hg19]  ZBTB14 - 18p11.31 [CytoView hg38]
Mapping of homologs : NCBIZBTB14 [Mapview hg19]  ZBTB14 [Mapview hg38]
OMIM602126   
Gene and transcription
Genbank (Entrez)AK313236 AW338628 BC057282 BC110519 BI561601
RefSeq transcript (Entrez)NM_001143823 NM_001243702 NM_001243704 NM_003409
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010859 NW_004929409
Consensus coding sequences : CCDS (NCBI)ZBTB14
Cluster EST : UnigeneHs.592340 [ NCBI ]
CGAP (NCI)Hs.592340
Alternative Splicing GalleryENSG00000198081
Gene ExpressionZBTB14 [ NCBI-GEO ]   ZBTB14 [ EBI - ARRAY_EXPRESS ]   ZBTB14 [ SEEK ]   ZBTB14 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7541
GTEX Portal (Tissue expression)ZBTB14
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43829   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43829  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43829
Splice isoforms : SwissVarO43829
PhosPhoSitePlusO43829
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)   
Domain families : Pfam (NCBI)pfam00651   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB14
DMDM Disease mutations7541
Blocks (Seattle)ZBTB14
SuperfamilyO43829
Human Protein AtlasENSG00000198081
Peptide AtlasO43829
HPRD03674
IPIIPI00307325   
Protein Interaction databases
DIP (DOE-UCLA)O43829
IntAct (EBI)O43829
FunCoupENSG00000198081
BioGRIDZBTB14
STRING (EMBL)ZBTB14
ZODIACZBTB14
Ontologies - Pathways
QuickGOO43829
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II regulatory region sequence-specific DNA binding  sequence-specific DNA binding RNA polymerase II transcription factor activity  sequence-specific DNA binding transcription factor activity  protein binding  nucleus  nucleoplasm  cytoplasm  transcription, DNA-templated  sequence-specific DNA binding  transcription regulatory region DNA binding  negative regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II regulatory region sequence-specific DNA binding  sequence-specific DNA binding RNA polymerase II transcription factor activity  sequence-specific DNA binding transcription factor activity  protein binding  nucleus  nucleoplasm  cytoplasm  transcription, DNA-templated  sequence-specific DNA binding  transcription regulatory region DNA binding  negative regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZBTB14
Atlas of Cancer Signalling NetworkZBTB14
Wikipedia pathwaysZBTB14
Orthology - Evolution
OrthoDB7541
GeneTree (enSembl)ENSG00000198081
Phylogenetic Trees/Animal Genes : TreeFamZBTB14
HOVERGENO43829
HOGENOMO43829
Homologs : HomoloGeneZBTB14
Homology/Alignments : Family Browser (UCSC)ZBTB14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB14
dbVarZBTB14
ClinVarZBTB14
1000_GenomesZBTB14 
Exome Variant ServerZBTB14
ExAC (Exome Aggregation Consortium)ZBTB14 (select the gene name)
Genetic variants : HAPMAP7541
Genomic Variants (DGV)ZBTB14 [DGVbeta]
DECIPHER (Syndromes)18:5289018-5296194  ENSG00000198081
CONAN: Copy Number AnalysisZBTB14 
Mutations
ICGC Data PortalZBTB14 
TCGA Data PortalZBTB14 
Broad Tumor PortalZBTB14
OASIS PortalZBTB14 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZBTB14
BioMutasearch ZBTB14
DgiDB (Drug Gene Interaction Database)ZBTB14
DoCM (Curated mutations)ZBTB14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB14 (select a term)
intoGenZBTB14
Cancer3DZBTB14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602126   
Orphanet
MedgenZBTB14
Genetic Testing Registry ZBTB14
NextProtO43829 [Medical]
TSGene7541
GENETestsZBTB14
Huge Navigator ZBTB14 [HugePedia]
snp3D : Map Gene to Disease7541
BioCentury BCIQZBTB14
ClinGenZBTB14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7541
Chemical/Pharm GKB GenePA37449
Clinical trialZBTB14
Miscellaneous
canSAR (ICR)ZBTB14 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB14
EVEXZBTB14
GoPubMedZBTB14
iHOPZBTB14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:03 CET 2017

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