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ZBTB20-AS1 (ZBTB20 antisense RNA 1)

Identity

Alias_namesZBTB20 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ZBTB20-AS1
LocusID (NCBI) 100131117
Atlas_Id 75850
Location 3q13.31  [Link to chromosome band 3q13]
Location_base_pair Starts at 114351811 and ends at 114388978 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB20-AS1   40640
Cards
Entrez_Gene (NCBI)ZBTB20-AS1  100131117  ZBTB20 antisense RNA 1
Aliases
GeneCards (Weizmann)ZBTB20-AS1
Ensembl hg19 (Hinxton)ENSG00000241560 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241560 [Gene_View]  chr3:114351811-114388978 [Contig_View]  ZBTB20-AS1 [Vega]
ICGC DataPortalENSG00000241560
TCGA cBioPortalZBTB20-AS1
AceView (NCBI)ZBTB20-AS1
Genatlas (Paris)ZBTB20-AS1
WikiGenes100131117
SOURCE (Princeton)ZBTB20-AS1
Genetics Home Reference (NIH)ZBTB20-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB20-AS1  -     chr3:114351811-114388978 +  3q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB20-AS1  -     3q13.31   [Description]    (hg19-Feb_2009)
EnsemblZBTB20-AS1 - 3q13.31 [CytoView hg19]  ZBTB20-AS1 - 3q13.31 [CytoView hg38]
Mapping of homologs : NCBIZBTB20-AS1 [Mapview hg19]  ZBTB20-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098660 BI831211 DB037313 DB047976
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZBTB20-AS1
Cluster EST : UnigeneHs.745259 [ NCBI ]
CGAP (NCI)Hs.745259
Alternative Splicing GalleryENSG00000241560
Gene ExpressionZBTB20-AS1 [ NCBI-GEO ]   ZBTB20-AS1 [ EBI - ARRAY_EXPRESS ]   ZBTB20-AS1 [ SEEK ]   ZBTB20-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB20-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131117
GTEX Portal (Tissue expression)ZBTB20-AS1
Human Protein AtlasENSG00000241560-ZBTB20-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZBTB20-AS1
DMDM Disease mutations100131117
Blocks (Seattle)ZBTB20-AS1
Human Protein Atlas [tissue]ENSG00000241560-ZBTB20-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000241560
BioGRIDZBTB20-AS1
STRING (EMBL)ZBTB20-AS1
ZODIACZBTB20-AS1
Ontologies - Pathways
Huge Navigator ZBTB20-AS1 [HugePedia]
snp3D : Map Gene to Disease100131117
BioCentury BCIQZBTB20-AS1
ClinGenZBTB20-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131117
Clinical trialZBTB20-AS1
Miscellaneous
canSAR (ICR)ZBTB20-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB20-AS1
EVEXZBTB20-AS1
GoPubMedZBTB20-AS1
iHOPZBTB20-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:09:26 CET 2017

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