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ZBTB20-AS3 (ZBTB20 antisense RNA 3)

Identity

Alias_namesZBTB20 antisense RNA 3 (non-protein coding)
Other alias-
HGNC (Hugo) ZBTB20-AS3
LocusID (NCBI) 104413890
Atlas_Id 76654
Location 3q13.31  [Link to chromosome band 3q13]
Location_base_pair Starts at 114873033 and ends at 114876514 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB20-AS3   42422
Cards
Entrez_Gene (NCBI)ZBTB20-AS3  104413890  ZBTB20 antisense RNA 3
Aliases
GeneCards (Weizmann)ZBTB20-AS3
Ensembl hg19 (Hinxton)ENSG00000239946 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000239946 [Gene_View]  chr3:114873033-114876514 [Contig_View]  ZBTB20-AS3 [Vega]
ICGC DataPortalENSG00000239946
TCGA cBioPortalZBTB20-AS3
AceView (NCBI)ZBTB20-AS3
Genatlas (Paris)ZBTB20-AS3
WikiGenes104413890
SOURCE (Princeton)ZBTB20-AS3
Genetics Home Reference (NIH)ZBTB20-AS3
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB20-AS3  -     chr3:114873033-114876514 +  3q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB20-AS3  -     3q13.31   [Description]    (hg19-Feb_2009)
EnsemblZBTB20-AS3 - 3q13.31 [CytoView hg19]  ZBTB20-AS3 - 3q13.31 [CytoView hg38]
Mapping of homologs : NCBIZBTB20-AS3 [Mapview hg19]  ZBTB20-AS3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF115192
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZBTB20-AS3
Cluster EST : UnigeneHs.612732 [ NCBI ]
CGAP (NCI)Hs.612732
Alternative Splicing GalleryENSG00000239946
Gene ExpressionZBTB20-AS3 [ NCBI-GEO ]   ZBTB20-AS3 [ EBI - ARRAY_EXPRESS ]   ZBTB20-AS3 [ SEEK ]   ZBTB20-AS3 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB20-AS3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104413890
GTEX Portal (Tissue expression)ZBTB20-AS3
Human Protein AtlasENSG00000239946-ZBTB20-AS3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZBTB20-AS3
DMDM Disease mutations104413890
Blocks (Seattle)ZBTB20-AS3
Human Protein Atlas [tissue]ENSG00000239946-ZBTB20-AS3 [tissue]
Protein Interaction databases
FunCoupENSG00000239946
BioGRIDZBTB20-AS3
STRING (EMBL)ZBTB20-AS3
ZODIACZBTB20-AS3
Ontologies - Pathways
Huge Navigator ZBTB20-AS3 [HugePedia]
snp3D : Map Gene to Disease104413890
BioCentury BCIQZBTB20-AS3
ClinGenZBTB20-AS3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104413890
Clinical trialZBTB20-AS3
Miscellaneous
canSAR (ICR)ZBTB20-AS3 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB20-AS3
EVEXZBTB20-AS3
GoPubMedZBTB20-AS3
iHOPZBTB20-AS3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:09:26 CET 2017

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