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ZBTB26 (zinc finger and BTB domain containing 26)

Identity

Alias_namesZNF481
zinc finger protein 481
Other aliasbioref
HGNC (Hugo) ZBTB26
LocusID (NCBI) 57684
Atlas_Id 75856
Location 9q33.2  [Link to chromosome band 9q33]
Location_base_pair Starts at 125680308 and ends at 125693792 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ABCA1 (9q31.1) / ZBTB26 (9q33.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB26   23383
Cards
Entrez_Gene (NCBI)ZBTB26  57684  zinc finger and BTB domain containing 26
AliasesZNF481; bioref
GeneCards (Weizmann)ZBTB26
Ensembl hg19 (Hinxton)ENSG00000171448 [Gene_View]  chr9:125680308-125693792 [Contig_View]  ZBTB26 [Vega]
Ensembl hg38 (Hinxton)ENSG00000171448 [Gene_View]  chr9:125680308-125693792 [Contig_View]  ZBTB26 [Vega]
ICGC DataPortalENSG00000171448
TCGA cBioPortalZBTB26
AceView (NCBI)ZBTB26
Genatlas (Paris)ZBTB26
WikiGenes57684
SOURCE (Princeton)ZBTB26
Genetics Home Reference (NIH)ZBTB26
Genomic and cartography
GoldenPath hg19 (UCSC)ZBTB26  -     chr9:125680308-125693792 -  9q33.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZBTB26  -     9q33.2   [Description]    (hg38-Dec_2013)
EnsemblZBTB26 - 9q33.2 [CytoView hg19]  ZBTB26 - 9q33.2 [CytoView hg38]
Mapping of homologs : NCBIZBTB26 [Mapview hg19]  ZBTB26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB046792 AF323460 AK057445 AK058083 BC018748
RefSeq transcript (Entrez)NM_001304363 NM_001304364 NM_020924
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)ZBTB26
Cluster EST : UnigeneHs.617843 [ NCBI ]
CGAP (NCI)Hs.617843
Alternative Splicing GalleryENSG00000171448
Gene ExpressionZBTB26 [ NCBI-GEO ]   ZBTB26 [ EBI - ARRAY_EXPRESS ]   ZBTB26 [ SEEK ]   ZBTB26 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57684
GTEX Portal (Tissue expression)ZBTB26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCK0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCK0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCK0
Splice isoforms : SwissVarQ9HCK0
PhosPhoSitePlusQ9HCK0
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00651    pfam00096   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB26
DMDM Disease mutations57684
Blocks (Seattle)ZBTB26
SuperfamilyQ9HCK0
Human Protein AtlasENSG00000171448
Peptide AtlasQ9HCK0
HPRD15692
IPIIPI00017087   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCK0
IntAct (EBI)Q9HCK0
FunCoupENSG00000171448
BioGRIDZBTB26
STRING (EMBL)ZBTB26
ZODIACZBTB26
Ontologies - Pathways
QuickGOQ9HCK0
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II regulatory region sequence-specific DNA binding  RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription  molecular_function  protein binding  cellular_component  nucleoplasm  cytoplasm  transcription, DNA-templated  biological_process  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  RNA polymerase II regulatory region sequence-specific DNA binding  RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription  molecular_function  protein binding  cellular_component  nucleoplasm  cytoplasm  transcription, DNA-templated  biological_process  metal ion binding  
NDEx NetworkZBTB26
Atlas of Cancer Signalling NetworkZBTB26
Wikipedia pathwaysZBTB26
Orthology - Evolution
OrthoDB57684
GeneTree (enSembl)ENSG00000171448
Phylogenetic Trees/Animal Genes : TreeFamZBTB26
HOVERGENQ9HCK0
HOGENOMQ9HCK0
Homologs : HomoloGeneZBTB26
Homology/Alignments : Family Browser (UCSC)ZBTB26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB26
dbVarZBTB26
ClinVarZBTB26
1000_GenomesZBTB26 
Exome Variant ServerZBTB26
ExAC (Exome Aggregation Consortium)ZBTB26 (select the gene name)
Genetic variants : HAPMAP57684
Genomic Variants (DGV)ZBTB26 [DGVbeta]
DECIPHER (Syndromes)9:125680308-125693792  ENSG00000171448
CONAN: Copy Number AnalysisZBTB26 
Mutations
ICGC Data PortalZBTB26 
TCGA Data PortalZBTB26 
Broad Tumor PortalZBTB26
OASIS PortalZBTB26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB26
DgiDB (Drug Gene Interaction Database)ZBTB26
DoCM (Curated mutations)ZBTB26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB26 (select a term)
intoGenZBTB26
Cancer3DZBTB26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZBTB26
Genetic Testing Registry ZBTB26
NextProtQ9HCK0 [Medical]
TSGene57684
GENETestsZBTB26
Huge Navigator ZBTB26 [HugePedia]
snp3D : Map Gene to Disease57684
BioCentury BCIQZBTB26
ClinGenZBTB26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57684
Chemical/Pharm GKB GenePA134914020
Clinical trialZBTB26
Miscellaneous
canSAR (ICR)ZBTB26 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB26
EVEXZBTB26
GoPubMedZBTB26
iHOPZBTB26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:05 CET 2017

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