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ZBTB32 (zinc finger and BTB domain containing 32)

Identity

Alias (NCBI)FAXF
FAZF
Rog
TZFP
ZNF538
HGNC (Hugo) ZBTB32
HGNC Alias symbTZFP
FAZF
FAXF
Rog
ZNF538
HGNC Alias namerepressor of GATA
LocusID (NCBI) 27033
Atlas_Id 51578
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35704558 and ends at 35717038 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZBTB32   16763
Cards
Entrez_Gene (NCBI)ZBTB32    zinc finger and BTB domain containing 32
AliasesFAXF; FAZF; Rog; TZFP; 
ZNF538
GeneCards (Weizmann)ZBTB32
Ensembl hg19 (Hinxton)ENSG00000011590 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000011590 [Gene_View]  ENSG00000011590 [Sequence]  chr19:35704558-35717038 [Contig_View]  ZBTB32 [Vega]
ICGC DataPortalENSG00000011590
TCGA cBioPortalZBTB32
AceView (NCBI)ZBTB32
Genatlas (Paris)ZBTB32
SOURCE (Princeton)ZBTB32
Genetics Home Reference (NIH)ZBTB32
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB32  -     chr19:35704558-35717038 +  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB32  -     19q13.12   [Description]    (hg19-Feb_2009)
GoldenPathZBTB32 - 19q13.12 [CytoView hg19]  ZBTB32 - 19q13.12 [CytoView hg38]
ImmunoBaseENSG00000011590
Genome Data Viewer NCBIZBTB32 [Mapview hg19]  
OMIM605859   
Gene and transcription
Genbank (Entrez)AF130255 AF165097 BC017700 BX095236 HY027719
RefSeq transcript (Entrez)NM_001316902 NM_001316903 NM_014383
Consensus coding sequences : CCDS (NCBI)ZBTB32
Gene ExpressionZBTB32 [ NCBI-GEO ]   ZBTB32 [ EBI - ARRAY_EXPRESS ]   ZBTB32 [ SEEK ]   ZBTB32 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB32 [ Firebrowse - Broad ]
GenevisibleExpression of ZBTB32 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27033
GTEX Portal (Tissue expression)ZBTB32
Human Protein AtlasENSG00000011590-ZBTB32 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2Y4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2Y4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2Y4
PhosPhoSitePlusQ9Y2Y4
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ_dom    SKP1/BTB/POZ_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)BTB (PF00651)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00651    pfam00096   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB32
PDB (RSDB)3M5B   
PDB Europe3M5B   
PDB (PDBSum)3M5B   
PDB (IMB)3M5B   
Structural Biology KnowledgeBase3M5B   
SCOP (Structural Classification of Proteins)3M5B   
CATH (Classification of proteins structures)3M5B   
SuperfamilyQ9Y2Y4
AlphaFold pdb e-kbQ9Y2Y4   
Human Protein Atlas [tissue]ENSG00000011590-ZBTB32 [tissue]
HPRD12055
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2Y4
IntAct (EBI)Q9Y2Y4
BioGRIDZBTB32
STRING (EMBL)ZBTB32
ZODIACZBTB32
Ontologies - Pathways
QuickGOQ9Y2Y4
Ontology : AmiGOnegative regulation of transcription by RNA polymerase II  chromatin  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription repressor activity, RNA polymerase II-specific  DNA-binding transcription repressor activity, RNA polymerase II-specific  DNA binding  protein binding  nucleus  nucleoplasm  regulation of transcription by RNA polymerase II  zinc ion binding  sequence-specific double-stranded DNA binding  
Ontology : EGO-EBInegative regulation of transcription by RNA polymerase II  chromatin  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription repressor activity, RNA polymerase II-specific  DNA-binding transcription repressor activity, RNA polymerase II-specific  DNA binding  protein binding  nucleus  nucleoplasm  regulation of transcription by RNA polymerase II  zinc ion binding  sequence-specific double-stranded DNA binding  
NDEx NetworkZBTB32
Atlas of Cancer Signalling NetworkZBTB32
Wikipedia pathwaysZBTB32
Orthology - Evolution
OrthoDB27033
GeneTree (enSembl)ENSG00000011590
Phylogenetic Trees/Animal Genes : TreeFamZBTB32
Homologs : HomoloGeneZBTB32
Homology/Alignments : Family Browser (UCSC)ZBTB32
Gene fusions - Rearrangements
Fusion : QuiverZBTB32
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB32
dbVarZBTB32
ClinVarZBTB32
MonarchZBTB32
1000_GenomesZBTB32 
Exome Variant ServerZBTB32
GNOMAD BrowserENSG00000011590
Varsome BrowserZBTB32
ACMGZBTB32 variants
VarityQ9Y2Y4
Genomic Variants (DGV)ZBTB32 [DGVbeta]
DECIPHERZBTB32 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZBTB32 
Mutations
ICGC Data PortalZBTB32 
TCGA Data PortalZBTB32 
Broad Tumor PortalZBTB32
OASIS PortalZBTB32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB32  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZBTB32
Mutations and Diseases : HGMDZBTB32
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZBTB32
DgiDB (Drug Gene Interaction Database)ZBTB32
DoCM (Curated mutations)ZBTB32
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB32
Cancer3DZBTB32
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605859   
Orphanet
DisGeNETZBTB32
MedgenZBTB32
Genetic Testing Registry ZBTB32
NextProtQ9Y2Y4 [Medical]
GENETestsZBTB32
Target ValidationZBTB32
Huge Navigator ZBTB32 [HugePedia]
ClinGenZBTB32
Clinical trials, drugs, therapy
MyCancerGenomeZBTB32
Protein Interactions : CTDZBTB32
Pharm GKB GenePA142670541
PharosQ9Y2Y4
Clinical trialZBTB32
Miscellaneous
canSAR (ICR)ZBTB32
HarmonizomeZBTB32
DataMed IndexZBTB32
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZBTB32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:38:46 CEST 2021

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