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ZBTB32 (zinc finger and BTB domain containing 32)

Identity

Alias_symbol (synonym)TZFP
FAZF
FAXF
Rog
ZNF538
Other alias
HGNC (Hugo) ZBTB32
LocusID (NCBI) 27033
Atlas_Id 51578
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 36195389 and ends at 36207940 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB32   16763
Cards
Entrez_Gene (NCBI)ZBTB32  27033  zinc finger and BTB domain containing 32
AliasesFAXF; FAZF; Rog; TZFP; 
ZNF538
GeneCards (Weizmann)ZBTB32
Ensembl hg19 (Hinxton)ENSG00000011590 [Gene_View]  chr19:36195389-36207940 [Contig_View]  ZBTB32 [Vega]
Ensembl hg38 (Hinxton)ENSG00000011590 [Gene_View]  chr19:36195389-36207940 [Contig_View]  ZBTB32 [Vega]
ICGC DataPortalENSG00000011590
TCGA cBioPortalZBTB32
AceView (NCBI)ZBTB32
Genatlas (Paris)ZBTB32
WikiGenes27033
SOURCE (Princeton)ZBTB32
Genetics Home Reference (NIH)ZBTB32
Genomic and cartography
GoldenPath hg19 (UCSC)ZBTB32  -     chr19:36195389-36207940 +  19q13.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZBTB32  -     19q13.12   [Description]    (hg38-Dec_2013)
EnsemblZBTB32 - 19q13.12 [CytoView hg19]  ZBTB32 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIZBTB32 [Mapview hg19]  ZBTB32 [Mapview hg38]
OMIM605859   
Gene and transcription
Genbank (Entrez)AF130255 AF165097 BC017700 BX095236 HY027719
RefSeq transcript (Entrez)NM_001316902 NM_001316903 NM_014383
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZBTB32
Cluster EST : UnigeneHs.99430 [ NCBI ]
CGAP (NCI)Hs.99430
Alternative Splicing GalleryENSG00000011590
Gene ExpressionZBTB32 [ NCBI-GEO ]   ZBTB32 [ EBI - ARRAY_EXPRESS ]   ZBTB32 [ SEEK ]   ZBTB32 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27033
GTEX Portal (Tissue expression)ZBTB32
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2Y4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2Y4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2Y4
Splice isoforms : SwissVarQ9Y2Y4
PhosPhoSitePlusQ9Y2Y4
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ_dom    SKP1/BTB/POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)   
Domain families : Pfam (NCBI)pfam00651   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB32
DMDM Disease mutations27033
Blocks (Seattle)ZBTB32
PDB (SRS)3M5B   
PDB (PDBSum)3M5B   
PDB (IMB)3M5B   
PDB (RSDB)3M5B   
Structural Biology KnowledgeBase3M5B   
SCOP (Structural Classification of Proteins)3M5B   
CATH (Classification of proteins structures)3M5B   
SuperfamilyQ9Y2Y4
Human Protein AtlasENSG00000011590
Peptide AtlasQ9Y2Y4
HPRD12055
IPIIPI00003915   IPI00178897   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2Y4
IntAct (EBI)Q9Y2Y4
FunCoupENSG00000011590
BioGRIDZBTB32
STRING (EMBL)ZBTB32
ZODIACZBTB32
Ontologies - Pathways
QuickGOQ9Y2Y4
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription corepressor activity  protein binding  nucleus  nucleoplasm  transcription from RNA polymerase II promoter  zinc ion binding  interstrand cross-link repair  DNA damage response, detection of DNA damage  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription corepressor activity  protein binding  nucleus  nucleoplasm  transcription from RNA polymerase II promoter  zinc ion binding  interstrand cross-link repair  DNA damage response, detection of DNA damage  
NDEx NetworkZBTB32
Atlas of Cancer Signalling NetworkZBTB32
Wikipedia pathwaysZBTB32
Orthology - Evolution
OrthoDB27033
GeneTree (enSembl)ENSG00000011590
Phylogenetic Trees/Animal Genes : TreeFamZBTB32
HOVERGENQ9Y2Y4
HOGENOMQ9Y2Y4
Homologs : HomoloGeneZBTB32
Homology/Alignments : Family Browser (UCSC)ZBTB32
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB32
dbVarZBTB32
ClinVarZBTB32
1000_GenomesZBTB32 
Exome Variant ServerZBTB32
ExAC (Exome Aggregation Consortium)ZBTB32 (select the gene name)
Genetic variants : HAPMAP27033
Genomic Variants (DGV)ZBTB32 [DGVbeta]
DECIPHER (Syndromes)19:36195389-36207940  ENSG00000011590
CONAN: Copy Number AnalysisZBTB32 
Mutations
ICGC Data PortalZBTB32 
TCGA Data PortalZBTB32 
Broad Tumor PortalZBTB32
OASIS PortalZBTB32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB32  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB32
DgiDB (Drug Gene Interaction Database)ZBTB32
DoCM (Curated mutations)ZBTB32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB32 (select a term)
intoGenZBTB32
Cancer3DZBTB32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605859   
Orphanet
MedgenZBTB32
Genetic Testing Registry ZBTB32
NextProtQ9Y2Y4 [Medical]
TSGene27033
GENETestsZBTB32
Huge Navigator ZBTB32 [HugePedia]
snp3D : Map Gene to Disease27033
BioCentury BCIQZBTB32
ClinGenZBTB32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27033
Chemical/Pharm GKB GenePA142670541
Clinical trialZBTB32
Miscellaneous
canSAR (ICR)ZBTB32 (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB32
EVEXZBTB32
GoPubMedZBTB32
iHOPZBTB32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:25:23 CEST 2017

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