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ZBTB34 (zinc finger and BTB domain containing 34)

Identity

Alias_symbol (synonym)KIAA1993
MGC24652
ZNF918
Other alias
HGNC (Hugo) ZBTB34
LocusID (NCBI) 403341
Atlas_Id 75858
Location 9q33.3  [Link to chromosome band 9q33]
Location_base_pair Starts at 126860665 and ends at 126885877 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB34   31446
Cards
Entrez_Gene (NCBI)ZBTB34  403341  zinc finger and BTB domain containing 34
AliasesZNF918
GeneCards (Weizmann)ZBTB34
Ensembl hg19 (Hinxton)ENSG00000177125 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177125 [Gene_View]  chr9:126860665-126885877 [Contig_View]  ZBTB34 [Vega]
ICGC DataPortalENSG00000177125
TCGA cBioPortalZBTB34
AceView (NCBI)ZBTB34
Genatlas (Paris)ZBTB34
WikiGenes403341
SOURCE (Princeton)ZBTB34
Genetics Home Reference (NIH)ZBTB34
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB34  -     chr9:126860665-126885877 +  9q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB34  -     9q33.3   [Description]    (hg19-Feb_2009)
EnsemblZBTB34 - 9q33.3 [CytoView hg19]  ZBTB34 - 9q33.3 [CytoView hg38]
Mapping of homologs : NCBIZBTB34 [Mapview hg19]  ZBTB34 [Mapview hg38]
OMIM611692   
Gene and transcription
Genbank (Entrez)AB082524 AK055661 AK074274 BC020929 BC035710
RefSeq transcript (Entrez)NM_001099270 NM_203482
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZBTB34
Cluster EST : UnigeneHs.177633 [ NCBI ]
CGAP (NCI)Hs.177633
Alternative Splicing GalleryENSG00000177125
Gene ExpressionZBTB34 [ NCBI-GEO ]   ZBTB34 [ EBI - ARRAY_EXPRESS ]   ZBTB34 [ SEEK ]   ZBTB34 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB34 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)403341
GTEX Portal (Tissue expression)ZBTB34
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCN2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCN2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCN2
Splice isoforms : SwissVarQ8NCN2
PhosPhoSitePlusQ8NCN2
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ_dom    SKP1/BTB/POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)   
Domain families : Pfam (NCBI)pfam00651   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB34
DMDM Disease mutations403341
Blocks (Seattle)ZBTB34
SuperfamilyQ8NCN2
Human Protein AtlasENSG00000177125
Peptide AtlasQ8NCN2
IPIIPI00168404   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCN2
IntAct (EBI)Q8NCN2
FunCoupENSG00000177125
BioGRIDZBTB34
STRING (EMBL)ZBTB34
ZODIACZBTB34
Ontologies - Pathways
QuickGOQ8NCN2
Ontology : AmiGODNA binding  nucleoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZBTB34
Atlas of Cancer Signalling NetworkZBTB34
Wikipedia pathwaysZBTB34
Orthology - Evolution
OrthoDB403341
GeneTree (enSembl)ENSG00000177125
Phylogenetic Trees/Animal Genes : TreeFamZBTB34
HOVERGENQ8NCN2
HOGENOMQ8NCN2
Homologs : HomoloGeneZBTB34
Homology/Alignments : Family Browser (UCSC)ZBTB34
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB34 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB34
dbVarZBTB34
ClinVarZBTB34
1000_GenomesZBTB34 
Exome Variant ServerZBTB34
ExAC (Exome Aggregation Consortium)ZBTB34 (select the gene name)
Genetic variants : HAPMAP403341
Genomic Variants (DGV)ZBTB34 [DGVbeta]
DECIPHERZBTB34 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZBTB34 
Mutations
ICGC Data PortalZBTB34 
TCGA Data PortalZBTB34 
Broad Tumor PortalZBTB34
OASIS PortalZBTB34 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB34  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB34
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB34
DgiDB (Drug Gene Interaction Database)ZBTB34
DoCM (Curated mutations)ZBTB34 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB34 (select a term)
intoGenZBTB34
Cancer3DZBTB34(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611692   
Orphanet
MedgenZBTB34
Genetic Testing Registry ZBTB34
NextProtQ8NCN2 [Medical]
TSGene403341
GENETestsZBTB34
Target ValidationZBTB34
Huge Navigator ZBTB34 [HugePedia]
snp3D : Map Gene to Disease403341
BioCentury BCIQZBTB34
ClinGenZBTB34
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD403341
Chemical/Pharm GKB GenePA134869916
Clinical trialZBTB34
Miscellaneous
canSAR (ICR)ZBTB34 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB34
EVEXZBTB34
GoPubMedZBTB34
iHOPZBTB34
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:06 CEST 2017

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