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ZBTB41 (zinc finger and BTB domain containing 41)

Identity

Alias_symbol (synonym)FRBZ1
FLJ36199
DKFZp686C06120
ZNF924
Other alias
HGNC (Hugo) ZBTB41
LocusID (NCBI) 360023
Atlas_Id 75862
Location 1q31.3  [Link to chromosome band 1q31]
Location_base_pair Starts at 197122814 and ends at 197169672 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB41   24819
Cards
Entrez_Gene (NCBI)ZBTB41  360023  zinc finger and BTB domain containing 41
AliasesFRBZ1; ZNF924
GeneCards (Weizmann)ZBTB41
Ensembl hg19 (Hinxton)ENSG00000177888 [Gene_View]  chr1:197122814-197169672 [Contig_View]  ZBTB41 [Vega]
Ensembl hg38 (Hinxton)ENSG00000177888 [Gene_View]  chr1:197122814-197169672 [Contig_View]  ZBTB41 [Vega]
ICGC DataPortalENSG00000177888
TCGA cBioPortalZBTB41
AceView (NCBI)ZBTB41
Genatlas (Paris)ZBTB41
WikiGenes360023
SOURCE (Princeton)ZBTB41
Genetics Home Reference (NIH)ZBTB41
Genomic and cartography
GoldenPath hg19 (UCSC)ZBTB41  -     chr1:197122814-197169672 -  1q31.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZBTB41  -     1q31.3   [Description]    (hg38-Dec_2013)
EnsemblZBTB41 - 1q31.3 [CytoView hg19]  ZBTB41 - 1q31.3 [CytoView hg38]
Mapping of homologs : NCBIZBTB41 [Mapview hg19]  ZBTB41 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128549 AW856335 AY163816 AY336933 BC043426
RefSeq transcript (Entrez)NM_194314
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)ZBTB41
Cluster EST : UnigeneHs.529439 [ NCBI ]
CGAP (NCI)Hs.529439
Alternative Splicing GalleryENSG00000177888
Gene ExpressionZBTB41 [ NCBI-GEO ]   ZBTB41 [ EBI - ARRAY_EXPRESS ]   ZBTB41 [ SEEK ]   ZBTB41 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)360023
GTEX Portal (Tissue expression)ZBTB41
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5SVQ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5SVQ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5SVQ8
Splice isoforms : SwissVarQ5SVQ8
PhosPhoSitePlusQ5SVQ8
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00651    pfam00096   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB41
DMDM Disease mutations360023
Blocks (Seattle)ZBTB41
SuperfamilyQ5SVQ8
Human Protein AtlasENSG00000177888
Peptide AtlasQ5SVQ8
HPRD17017
IPIIPI00411515   IPI00828141   
Protein Interaction databases
DIP (DOE-UCLA)Q5SVQ8
IntAct (EBI)Q5SVQ8
FunCoupENSG00000177888
BioGRIDZBTB41
STRING (EMBL)ZBTB41
ZODIACZBTB41
Ontologies - Pathways
QuickGOQ5SVQ8
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZBTB41
Atlas of Cancer Signalling NetworkZBTB41
Wikipedia pathwaysZBTB41
Orthology - Evolution
OrthoDB360023
GeneTree (enSembl)ENSG00000177888
Phylogenetic Trees/Animal Genes : TreeFamZBTB41
HOVERGENQ5SVQ8
HOGENOMQ5SVQ8
Homologs : HomoloGeneZBTB41
Homology/Alignments : Family Browser (UCSC)ZBTB41
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB41 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB41
dbVarZBTB41
ClinVarZBTB41
1000_GenomesZBTB41 
Exome Variant ServerZBTB41
ExAC (Exome Aggregation Consortium)ZBTB41 (select the gene name)
Genetic variants : HAPMAP360023
Genomic Variants (DGV)ZBTB41 [DGVbeta]
DECIPHER (Syndromes)1:197122814-197169672  ENSG00000177888
CONAN: Copy Number AnalysisZBTB41 
Mutations
ICGC Data PortalZBTB41 
TCGA Data PortalZBTB41 
Broad Tumor PortalZBTB41
OASIS PortalZBTB41 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB41  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB41
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB41
DgiDB (Drug Gene Interaction Database)ZBTB41
DoCM (Curated mutations)ZBTB41 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB41 (select a term)
intoGenZBTB41
Cancer3DZBTB41(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZBTB41
Genetic Testing Registry ZBTB41
NextProtQ5SVQ8 [Medical]
TSGene360023
GENETestsZBTB41
Huge Navigator ZBTB41 [HugePedia]
snp3D : Map Gene to Disease360023
BioCentury BCIQZBTB41
ClinGenZBTB41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD360023
Chemical/Pharm GKB GenePA142670545
Clinical trialZBTB41
Miscellaneous
canSAR (ICR)ZBTB41 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB41
EVEXZBTB41
GoPubMedZBTB41
iHOPZBTB41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:06 CET 2017

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