Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ZBTB44 (zinc finger and BTB domain containing 44)

Identity

Alias (NCBI)BTBD15
HSPC063
ZNF851
HGNC (Hugo) ZBTB44
HGNC Alias symbHSPC063
ZNF851
HGNC Previous nameBTBD15
HGNC Previous nameBTB (POZ) domain containing 15
LocusID (NCBI) 29068
Atlas_Id 75865
Location 11q24.3  [Link to chromosome band 11q24]
Location_base_pair Starts at 130226679 and ends at 130314712 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IPO9 (1q32.1) / ZBTB44 (11q24.3)OTUD5 (Xp11.23) / ZBTB44 (11q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ZBTB44   25001
Cards
Entrez_Gene (NCBI)ZBTB44    zinc finger and BTB domain containing 44
AliasesBTBD15; HSPC063; ZNF851
GeneCards (Weizmann)ZBTB44
Ensembl hg19 (Hinxton)ENSG00000196323 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196323 [Gene_View]  ENSG00000196323 [Sequence]  chr11:130226679-130314712 [Contig_View]  ZBTB44 [Vega]
ICGC DataPortalENSG00000196323
TCGA cBioPortalZBTB44
AceView (NCBI)ZBTB44
Genatlas (Paris)ZBTB44
SOURCE (Princeton)ZBTB44
Genetics Home Reference (NIH)ZBTB44
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB44  -     chr11:130226679-130314712 -  11q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB44  -     11q24.3   [Description]    (hg19-Feb_2009)
GoldenPathZBTB44 - 11q24.3 [CytoView hg19]  ZBTB44 - 11q24.3 [CytoView hg38]
ImmunoBaseENSG00000196323
genome Data Viewer NCBIZBTB44 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF161548 AI446067 AK023933 AK024659 AK026770
RefSeq transcript (Entrez)NM_001301098 NM_001301099 NM_001370219 NM_001370220 NM_001370221 NM_001370222 NM_001370223 NM_014155
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZBTB44
Alternative Splicing GalleryENSG00000196323
Gene ExpressionZBTB44 [ NCBI-GEO ]   ZBTB44 [ EBI - ARRAY_EXPRESS ]   ZBTB44 [ SEEK ]   ZBTB44 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB44 [ Firebrowse - Broad ]
GenevisibleExpression of ZBTB44 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29068
GTEX Portal (Tissue expression)ZBTB44
Human Protein AtlasENSG00000196323-ZBTB44 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCP5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCP5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCP5
Splice isoforms : SwissVarQ8NCP5
PhosPhoSitePlusQ8NCP5
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ_dom    SKP1/BTB/POZ_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)BTB (PF00651)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00651    pfam00096   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB44
Blocks (Seattle)ZBTB44
SuperfamilyQ8NCP5
Human Protein Atlas [tissue]ENSG00000196323-ZBTB44 [tissue]
Peptide AtlasQ8NCP5
HPRD13692
IPIIPI00419939   IPI00827772   IPI00827668   IPI00746523   IPI01014369   IPI00980973   IPI00983636   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCP5
IntAct (EBI)Q8NCP5
BioGRIDZBTB44
STRING (EMBL)ZBTB44
ZODIACZBTB44
Ontologies - Pathways
QuickGOQ8NCP5
Ontology : AmiGODNA binding  protein binding  nucleus  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  metal ion binding  
NDEx NetworkZBTB44
Atlas of Cancer Signalling NetworkZBTB44
Wikipedia pathwaysZBTB44
Orthology - Evolution
OrthoDB29068
GeneTree (enSembl)ENSG00000196323
Phylogenetic Trees/Animal Genes : TreeFamZBTB44
HOGENOMQ8NCP5
Homologs : HomoloGeneZBTB44
Homology/Alignments : Family Browser (UCSC)ZBTB44
Gene fusions - Rearrangements
Fusion : QuiverZBTB44
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB44 [hg38]
dbVarZBTB44
ClinVarZBTB44
MonarchZBTB44
1000_GenomesZBTB44 
Exome Variant ServerZBTB44
GNOMAD BrowserENSG00000196323
Varsome BrowserZBTB44
Genomic Variants (DGV)ZBTB44 [DGVbeta]
DECIPHERZBTB44 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZBTB44 
Mutations
ICGC Data PortalZBTB44 
TCGA Data PortalZBTB44 
Broad Tumor PortalZBTB44
OASIS PortalZBTB44 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB44  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZBTB44
Mutations and Diseases : HGMDZBTB44
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB44
DgiDB (Drug Gene Interaction Database)ZBTB44
DoCM (Curated mutations)ZBTB44 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB44 (select a term)
intoGenZBTB44
Cancer3DZBTB44(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZBTB44
MedgenZBTB44
Genetic Testing Registry ZBTB44
NextProtQ8NCP5 [Medical]
GENETestsZBTB44
Target ValidationZBTB44
Huge Navigator ZBTB44 [HugePedia]
ClinGenZBTB44
Clinical trials, drugs, therapy
MyCancerGenomeZBTB44
Protein Interactions : CTD
Pharm GKB GenePA162409447
Clinical trialZBTB44
Miscellaneous
canSAR (ICR)ZBTB44 (select the gene name)
HarmonizomeZBTB44
DataMed IndexZBTB44
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB44
EVEXZBTB44
GoPubMedZBTB44
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:35:13 CET 2020
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