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ZBTB45 (zinc finger and BTB domain containing 45)

Identity

Alias_namesZNF499
zinc finger protein 499
Alias_symbol (synonym)FLJ14486
Other alias
HGNC (Hugo) ZBTB45
LocusID (NCBI) 84878
Atlas_Id 75866
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58513530 and ends at 58519559 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SAE1 (19q13.32) / ZBTB45 (19q13.43)TRIM28 (19q13.43) / ZBTB45 (19q13.43)ZBTB45 (19q13.43) / ZBTB45 (19q13.43)
ZBTB45 (19q13.43) / ZFR2 (19p13.3)SAE1 ZBTB45TRIM28 ZBTB45

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB45   23715
Cards
Entrez_Gene (NCBI)ZBTB45  84878  zinc finger and BTB domain containing 45
AliasesZNF499
GeneCards (Weizmann)ZBTB45
Ensembl hg19 (Hinxton)ENSG00000119574 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119574 [Gene_View]  chr19:58513530-58519559 [Contig_View]  ZBTB45 [Vega]
ICGC DataPortalENSG00000119574
TCGA cBioPortalZBTB45
AceView (NCBI)ZBTB45
Genatlas (Paris)ZBTB45
WikiGenes84878
SOURCE (Princeton)ZBTB45
Genetics Home Reference (NIH)ZBTB45
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB45  -     chr19:58513530-58519559 -  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB45  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblZBTB45 - 19q13.43 [CytoView hg19]  ZBTB45 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZBTB45 [Mapview hg19]  ZBTB45 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK027392 AK130056 AL831909 BC024738 DA394169
RefSeq transcript (Entrez)NM_001316978 NM_001316979 NM_001316980 NM_001316981 NM_001316982 NM_032792
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZBTB45
Cluster EST : UnigeneHs.515662 [ NCBI ]
CGAP (NCI)Hs.515662
Alternative Splicing GalleryENSG00000119574
Gene ExpressionZBTB45 [ NCBI-GEO ]   ZBTB45 [ EBI - ARRAY_EXPRESS ]   ZBTB45 [ SEEK ]   ZBTB45 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB45 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84878
GTEX Portal (Tissue expression)ZBTB45
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96K62   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96K62  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96K62
Splice isoforms : SwissVarQ96K62
PhosPhoSitePlusQ96K62
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ_dom    SKP1/BTB/POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00651    pfam00096   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB45
DMDM Disease mutations84878
Blocks (Seattle)ZBTB45
SuperfamilyQ96K62
Human Protein AtlasENSG00000119574
Peptide AtlasQ96K62
HPRD15808
IPIIPI00064428   
Protein Interaction databases
DIP (DOE-UCLA)Q96K62
IntAct (EBI)Q96K62
FunCoupENSG00000119574
BioGRIDZBTB45
STRING (EMBL)ZBTB45
ZODIACZBTB45
Ontologies - Pathways
QuickGOQ96K62
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZBTB45
Atlas of Cancer Signalling NetworkZBTB45
Wikipedia pathwaysZBTB45
Orthology - Evolution
OrthoDB84878
GeneTree (enSembl)ENSG00000119574
Phylogenetic Trees/Animal Genes : TreeFamZBTB45
HOVERGENQ96K62
HOGENOMQ96K62
Homologs : HomoloGeneZBTB45
Homology/Alignments : Family Browser (UCSC)ZBTB45
Gene fusions - Rearrangements
Fusion: TCGASAE1 ZBTB45
Fusion: TCGATRIM28 ZBTB45
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB45 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB45
dbVarZBTB45
ClinVarZBTB45
1000_GenomesZBTB45 
Exome Variant ServerZBTB45
ExAC (Exome Aggregation Consortium)ZBTB45 (select the gene name)
Genetic variants : HAPMAP84878
Genomic Variants (DGV)ZBTB45 [DGVbeta]
DECIPHERZBTB45 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZBTB45 
Mutations
ICGC Data PortalZBTB45 
TCGA Data PortalZBTB45 
Broad Tumor PortalZBTB45
OASIS PortalZBTB45 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB45  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB45
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB45
DgiDB (Drug Gene Interaction Database)ZBTB45
DoCM (Curated mutations)ZBTB45 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB45 (select a term)
intoGenZBTB45
Cancer3DZBTB45(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZBTB45
Genetic Testing Registry ZBTB45
NextProtQ96K62 [Medical]
TSGene84878
GENETestsZBTB45
Target ValidationZBTB45
Huge Navigator ZBTB45 [HugePedia]
snp3D : Map Gene to Disease84878
BioCentury BCIQZBTB45
ClinGenZBTB45
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84878
Chemical/Pharm GKB GenePA162409464
Clinical trialZBTB45
Miscellaneous
canSAR (ICR)ZBTB45 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB45
EVEXZBTB45
GoPubMedZBTB45
iHOPZBTB45
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:28 CEST 2017

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