ZBTB48 (zinc finger and BTB domain containing 48)

Identity

Other names	HKR3
	ZNF855
	pp9964
HGNC	ZBTB48
Location	1p36.3
Location_base_pair	Starts at 6562650 and ends at 6571927 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	ZBTB48   4930
Entrez_Gene	ZBTB48  3104  zinc finger and BTB domain containing 48
	Cards
GeneCards	ZBTB48
Ensembl	ENSG00000204859 [Gene_View]  ZBTB48 [Vega]
Genatlas	ZBTB48
	Genomic and cartography
GoldenPath	ZBTB48  -  1p36.3   chr1:6562650-6571927 +  1p36.31   [Description]    (hg18-March_2006)
Ensembl	ZBTB48 - 1p36.31 [CytoView]
NCBI	Mapview
OMIM	165270 Disease map [OMIM]
HomoloGene	ZBTB48
	Gene and transcription
Genbank	AF318381 [ ENTREZ ]
Genbank	AK290156 [ ENTREZ ]
Genbank	AK312786 [ ENTREZ ]
Genbank	BC013573 [ ENTREZ ]
Genbank	BP281477 [ ENTREZ ]
RefSeq	NM_005341 [ SRS ]    NM_005341 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NT_021937 [ SRS ]    NT_021937 [ ENTREZ ]
RefSeq	NW_001838523 [ SRS ]    NW_001838523 [ ENTREZ ]
RefSeq	NW_923572 [ SRS ]    NW_923572 [ ENTREZ ]
CCDS	ZBTB48 CCDS - NCBI
AceView	ZBTB48 AceView - NCBI
Unigene	Hs.502330 [ SRS ]    Hs.502330 [ NCBI ]
	Protein : pattern, domain, 3D structure
SwissProt	P10074 [ SRS]    P10074 [ EXPASY ]     P10074 [ INTERPRO ]     P10074 [ UNIPROT ] P10074 [ VarSplice FASTA ]
Prosite	PS50097 BTB [ SRS ]    PS50097 BTB [ Expasy ]
Prosite	PS00028 ZINC_FINGER_C2H2_1 [ SRS ]    PS00028 ZINC_FINGER_C2H2_1 [ Expasy ]
Prosite	PS50157 ZINC_FINGER_C2H2_2 [ SRS ]    PS50157 ZINC_FINGER_C2H2_2 [ Expasy ]
Interpro	IPR000210 BTB/POZ-like [ SRS ]    IPR000210 BTB/POZ-like [ EBI ]
Interpro	IPR011333 BTB/POZ_fold [ SRS ]    IPR011333 BTB/POZ_fold [ EBI ]
Interpro	IPR013069 BTB_POZ [ SRS ]    IPR013069 BTB_POZ [ EBI ]
Interpro	IPR007087 Znf_C2H2 [ SRS ]    IPR007087 Znf_C2H2 [ EBI ]
Interpro	IPR015880 Znf_C2H2-like [ SRS ]    IPR015880 Znf_C2H2-like [ EBI ]
Interpro	IPR013087 Znf_C2H2/integrase_DNA-bd [ SRS ]    IPR013087 Znf_C2H2/integrase_DNA-bd [ EBI ]
CluSTr	P10074
Pfam	PF00651 BTB [ SRS ]    PF00651 BTB [ Sanger ]    pfam00651 [ NCBI-CDD ]
Pfam	PF00096 zf-C2H2 [ SRS ]    PF00096 zf-C2H2 [ Sanger ]    pfam00096 [ NCBI-CDD ]
Smart	SM00225 BTB [EMBL]
Smart	SM00355 ZnF_C2H2 [EMBL]
Blocks	P10074
PDB	3B84 [ SRS ]    3B84 [ PdbSum ],   3B84 [ IMB ]   3B84 [ RSDB ]
HPRD	01316
	Protein Interaction databases
DIP	P10074
IntAct	P10074
	Polymorphism : SNP, mutations, diseases
OMIM	165270    [ map ]
GENETests	165270
SNP	ZBTB48 [dbSNP-NCBI]
SNP	NM_005341 [SNP-NCI]
SNP	ZBTB48 [GeneSNPs - Utah]  ZBTB48] [HGBASE - SRS]
HAPMAP	ZBTB48 [HAPMAP]
HGMD	ZBTB48
Genetic Association	ZBTB48
CDC HuGE	ZBTB48
	General knowledge
Family Browser	ZBTB48 [UCSC Family Browser]
SOURCE	NM_005341
SMD	Hs.502330
SAGE	Hs.502330
GO	transcription factor activity [Amigo]  transcription factor activity
GO	protein binding [Amigo]  protein binding
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	zinc ion binding [Amigo]  zinc ion binding
GO	metal ion binding [Amigo]  metal ion binding
PubGene	ZBTB48
TreeFam	ZBTB48
CTD	3104 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ZBTB48 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 14:19:51 2008