Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZBTB7B (zinc finger and BTB domain containing 7B)

Identity

Alias_namesZFP67
zinc finger protein 67 homolog (mouse)
Alias_symbol (synonym)ZBTB15
c-Krox
hcKrox
ZNF857B
Other aliasCKROX
THPOK
ZFP-67
c-KROX
hcKROX
HGNC (Hugo) ZBTB7B
LocusID (NCBI) 51043
Atlas_Id 53480
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 154975106 and ends at 154991001 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ZBTB7B (1q21.3) / CLSTN2 (3q23)ZBTB7B (1q21.3) / STOM (9q33.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB7B   18668
Cards
Entrez_Gene (NCBI)ZBTB7B  51043  zinc finger and BTB domain containing 7B
AliasesCKROX; THPOK; ZBTB15; ZFP-67; 
ZFP67; ZNF857B; c-KROX; hcKROX
GeneCards (Weizmann)ZBTB7B
Ensembl hg19 (Hinxton)ENSG00000160685 [Gene_View]  chr1:154975106-154991001 [Contig_View]  ZBTB7B [Vega]
Ensembl hg38 (Hinxton)ENSG00000160685 [Gene_View]  chr1:154975106-154991001 [Contig_View]  ZBTB7B [Vega]
ICGC DataPortalENSG00000160685
TCGA cBioPortalZBTB7B
AceView (NCBI)ZBTB7B
Genatlas (Paris)ZBTB7B
WikiGenes51043
SOURCE (Princeton)ZBTB7B
Genetics Home Reference (NIH)ZBTB7B
Genomic and cartography
GoldenPath hg19 (UCSC)ZBTB7B  -     chr1:154975106-154991001 +  1q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZBTB7B  -     1q21.3   [Description]    (hg38-Dec_2013)
EnsemblZBTB7B - 1q21.3 [CytoView hg19]  ZBTB7B - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIZBTB7B [Mapview hg19]  ZBTB7B [Mapview hg38]
OMIM607646   
Gene and transcription
Genbank (Entrez)AF007833 AI270090 AK127884 AK291619 AK304762
RefSeq transcript (Entrez)NM_001252406 NM_001256455
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)ZBTB7B
Cluster EST : UnigeneHs.744441 [ NCBI ]
CGAP (NCI)Hs.744441
Alternative Splicing GalleryENSG00000160685
Gene ExpressionZBTB7B [ NCBI-GEO ]   ZBTB7B [ EBI - ARRAY_EXPRESS ]   ZBTB7B [ SEEK ]   ZBTB7B [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB7B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51043
GTEX Portal (Tissue expression)ZBTB7B
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15156   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15156  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15156
Splice isoforms : SwissVarO15156
PhosPhoSitePlusO15156
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ_dom    SKP1/BTB/POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)   
Domain families : Pfam (NCBI)pfam00651   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB7B
DMDM Disease mutations51043
Blocks (Seattle)ZBTB7B
SuperfamilyO15156
Human Protein AtlasENSG00000160685
Peptide AtlasO15156
HPRD09625
IPIIPI00026277   IPI00937353   IPI00921032   
Protein Interaction databases
DIP (DOE-UCLA)O15156
IntAct (EBI)O15156
FunCoupENSG00000160685
BioGRIDZBTB7B
STRING (EMBL)ZBTB7B
ZODIACZBTB7B
Ontologies - Pathways
QuickGOO15156
Ontology : AmiGODNA binding  protein binding  nucleus  nucleoplasm  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  multicellular organism development  ectoderm development  positive regulation of gene expression  cell differentiation  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  nucleoplasm  regulation of transcription, DNA-templated  transcription from RNA polymerase II promoter  multicellular organism development  ectoderm development  positive regulation of gene expression  cell differentiation  metal ion binding  
NDEx NetworkZBTB7B
Atlas of Cancer Signalling NetworkZBTB7B
Wikipedia pathwaysZBTB7B
Orthology - Evolution
OrthoDB51043
GeneTree (enSembl)ENSG00000160685
Phylogenetic Trees/Animal Genes : TreeFamZBTB7B
HOVERGENO15156
HOGENOMO15156
Homologs : HomoloGeneZBTB7B
Homology/Alignments : Family Browser (UCSC)ZBTB7B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB7B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB7B
dbVarZBTB7B
ClinVarZBTB7B
1000_GenomesZBTB7B 
Exome Variant ServerZBTB7B
ExAC (Exome Aggregation Consortium)ZBTB7B (select the gene name)
Genetic variants : HAPMAP51043
Genomic Variants (DGV)ZBTB7B [DGVbeta]
DECIPHER (Syndromes)1:154975106-154991001  ENSG00000160685
CONAN: Copy Number AnalysisZBTB7B 
Mutations
ICGC Data PortalZBTB7B 
TCGA Data PortalZBTB7B 
Broad Tumor PortalZBTB7B
OASIS PortalZBTB7B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB7B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB7B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB7B
DgiDB (Drug Gene Interaction Database)ZBTB7B
DoCM (Curated mutations)ZBTB7B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB7B (select a term)
intoGenZBTB7B
Cancer3DZBTB7B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607646   
Orphanet
MedgenZBTB7B
Genetic Testing Registry ZBTB7B
NextProtO15156 [Medical]
TSGene51043
GENETestsZBTB7B
Huge Navigator ZBTB7B [HugePedia]
snp3D : Map Gene to Disease51043
BioCentury BCIQZBTB7B
ClinGenZBTB7B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51043
Chemical/Pharm GKB GenePA38630
Clinical trialZBTB7B
Miscellaneous
canSAR (ICR)ZBTB7B (select the gene name)
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB7B
EVEXZBTB7B
GoPubMedZBTB7B
iHOPZBTB7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:25:24 CEST 2017

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