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ZBTB8A (zinc finger and BTB domain containing 8A)

Identity

Alias_namesZBTB8
zinc finger and BTB domain containing 8
Alias_symbol (synonym)BOZF1
FLJ90065
ZNF916A
Other alias
HGNC (Hugo) ZBTB8A
LocusID (NCBI) 653121
Atlas_Id 75872
Location 1p35.1  [Link to chromosome band 1p35]
Location_base_pair Starts at 32539145 and ends at 32605950 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB8A   24172
Cards
Entrez_Gene (NCBI)ZBTB8A  653121  zinc finger and BTB domain containing 8A
AliasesBOZF1; ZBTB8; ZNF916A
GeneCards (Weizmann)ZBTB8A
Ensembl hg19 (Hinxton)ENSG00000160062 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160062 [Gene_View]  chr1:32539145-32605950 [Contig_View]  ZBTB8A [Vega]
ICGC DataPortalENSG00000160062
TCGA cBioPortalZBTB8A
AceView (NCBI)ZBTB8A
Genatlas (Paris)ZBTB8A
WikiGenes653121
SOURCE (Princeton)ZBTB8A
Genetics Home Reference (NIH)ZBTB8A
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB8A  -     chr1:32539145-32605950 +  1p35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB8A  -     1p35.1   [Description]    (hg19-Feb_2009)
EnsemblZBTB8A - 1p35.1 [CytoView hg19]  ZBTB8A - 1p35.1 [CytoView hg38]
Mapping of homologs : NCBIZBTB8A [Mapview hg19]  ZBTB8A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF548353 AK074546 AY157873 BC015067 BC015239
RefSeq transcript (Entrez)NM_001040441 NM_001291496 NM_144621
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZBTB8A
Cluster EST : UnigeneHs.546479 [ NCBI ]
CGAP (NCI)Hs.546479
Alternative Splicing GalleryENSG00000160062
Gene ExpressionZBTB8A [ NCBI-GEO ]   ZBTB8A [ EBI - ARRAY_EXPRESS ]   ZBTB8A [ SEEK ]   ZBTB8A [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB8A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653121
GTEX Portal (Tissue expression)ZBTB8A
Human Protein AtlasENSG00000160062-ZBTB8A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BR9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BR9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BR9
Splice isoforms : SwissVarQ96BR9
PhosPhoSitePlusQ96BR9
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ_dom    SKP1/BTB/POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)   
Domain families : Pfam (NCBI)pfam00651   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZBTB8A
DMDM Disease mutations653121
Blocks (Seattle)ZBTB8A
SuperfamilyQ96BR9
Human Protein Atlas [tissue]ENSG00000160062-ZBTB8A [tissue]
Peptide AtlasQ96BR9
HPRD10315
IPIIPI00292615   IPI00787891   
Protein Interaction databases
DIP (DOE-UCLA)Q96BR9
IntAct (EBI)Q96BR9
FunCoupENSG00000160062
BioGRIDZBTB8A
STRING (EMBL)ZBTB8A
ZODIACZBTB8A
Ontologies - Pathways
QuickGOQ96BR9
Ontology : AmiGOmolecular_function  DNA binding  protein binding  cellular_component  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  
Ontology : EGO-EBImolecular_function  DNA binding  protein binding  cellular_component  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  
NDEx NetworkZBTB8A
Atlas of Cancer Signalling NetworkZBTB8A
Wikipedia pathwaysZBTB8A
Orthology - Evolution
OrthoDB653121
GeneTree (enSembl)ENSG00000160062
Phylogenetic Trees/Animal Genes : TreeFamZBTB8A
HOVERGENQ96BR9
HOGENOMQ96BR9
Homologs : HomoloGeneZBTB8A
Homology/Alignments : Family Browser (UCSC)ZBTB8A
Gene fusions - Rearrangements
Fusion: Tumor Portal ZBTB8A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZBTB8A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZBTB8A
dbVarZBTB8A
ClinVarZBTB8A
1000_GenomesZBTB8A 
Exome Variant ServerZBTB8A
ExAC (Exome Aggregation Consortium)ENSG00000160062
GNOMAD BrowserENSG00000160062
Genetic variants : HAPMAP653121
Genomic Variants (DGV)ZBTB8A [DGVbeta]
DECIPHERZBTB8A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZBTB8A 
Mutations
ICGC Data PortalZBTB8A 
TCGA Data PortalZBTB8A 
Broad Tumor PortalZBTB8A
OASIS PortalZBTB8A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZBTB8A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZBTB8A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZBTB8A
DgiDB (Drug Gene Interaction Database)ZBTB8A
DoCM (Curated mutations)ZBTB8A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZBTB8A (select a term)
intoGenZBTB8A
Cancer3DZBTB8A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZBTB8A
Genetic Testing Registry ZBTB8A
NextProtQ96BR9 [Medical]
TSGene653121
GENETestsZBTB8A
Target ValidationZBTB8A
Huge Navigator ZBTB8A [HugePedia]
snp3D : Map Gene to Disease653121
BioCentury BCIQZBTB8A
ClinGenZBTB8A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653121
Chemical/Pharm GKB GenePA164727627
Clinical trialZBTB8A
Miscellaneous
canSAR (ICR)ZBTB8A (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB8A
EVEXZBTB8A
GoPubMedZBTB8A
iHOPZBTB8A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:36:15 CET 2017

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