Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZC2HC1C (zinc finger C2HC-type containing 1C)

Identity

Alias_namesC14orf140
FAM164C
chromosome 14 open reading frame 140
family with sequence similarity 164, member C
Other alias
HGNC (Hugo) ZC2HC1C
LocusID (NCBI) 79696
Atlas_Id 75876
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 75069577 and ends at 75079987 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZC2HC1C   20354
Cards
Entrez_Gene (NCBI)ZC2HC1C  79696  zinc finger C2HC-type containing 1C
AliasesC14orf140; FAM164C
GeneCards (Weizmann)ZC2HC1C
Ensembl hg19 (Hinxton)ENSG00000119703 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119703 [Gene_View]  chr14:75069577-75079987 [Contig_View]  ZC2HC1C [Vega]
ICGC DataPortalENSG00000119703
TCGA cBioPortalZC2HC1C
AceView (NCBI)ZC2HC1C
Genatlas (Paris)ZC2HC1C
WikiGenes79696
SOURCE (Princeton)ZC2HC1C
Genetics Home Reference (NIH)ZC2HC1C
Genomic and cartography
GoldenPath hg38 (UCSC)ZC2HC1C  -     chr14:75069577-75079987 +  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZC2HC1C  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblZC2HC1C - 14q24.3 [CytoView hg19]  ZC2HC1C - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIZC2HC1C [Mapview hg19]  ZC2HC1C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026746 AK223359 AK303882 BC004259 BQ061857
RefSeq transcript (Entrez)NM_001042430 NM_001330191 NM_024643
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZC2HC1C
Cluster EST : UnigeneHs.48642 [ NCBI ]
CGAP (NCI)Hs.48642
Alternative Splicing GalleryENSG00000119703
Gene ExpressionZC2HC1C [ NCBI-GEO ]   ZC2HC1C [ EBI - ARRAY_EXPRESS ]   ZC2HC1C [ SEEK ]   ZC2HC1C [ MEM ]
Gene Expression Viewer (FireBrowse)ZC2HC1C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79696
GTEX Portal (Tissue expression)ZC2HC1C
Human Protein AtlasENSG00000119703-ZC2HC1C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ53FD0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ53FD0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ53FD0
Splice isoforms : SwissVarQ53FD0
PhosPhoSitePlusQ53FD0
Domains : Interpro (EBI)ZNF_C2HC_dom_1C   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZC2HC1C
DMDM Disease mutations79696
Blocks (Seattle)ZC2HC1C
SuperfamilyQ53FD0
Human Protein Atlas [tissue]ENSG00000119703-ZC2HC1C [tissue]
Peptide AtlasQ53FD0
HPRD16607
IPIIPI00760585   IPI00051926   IPI00977006   IPI01024958   IPI00984280   IPI00983595   IPI00976516   
Protein Interaction databases
DIP (DOE-UCLA)Q53FD0
IntAct (EBI)Q53FD0
FunCoupENSG00000119703
BioGRIDZC2HC1C
STRING (EMBL)ZC2HC1C
ZODIACZC2HC1C
Ontologies - Pathways
QuickGOQ53FD0
Ontology : AmiGOprotein binding  metal ion binding  
Ontology : EGO-EBIprotein binding  metal ion binding  
NDEx NetworkZC2HC1C
Atlas of Cancer Signalling NetworkZC2HC1C
Wikipedia pathwaysZC2HC1C
Orthology - Evolution
OrthoDB79696
GeneTree (enSembl)ENSG00000119703
Phylogenetic Trees/Animal Genes : TreeFamZC2HC1C
HOVERGENQ53FD0
HOGENOMQ53FD0
Homologs : HomoloGeneZC2HC1C
Homology/Alignments : Family Browser (UCSC)ZC2HC1C
Gene fusions - Rearrangements
Fusion: Tumor Portal ZC2HC1C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZC2HC1C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZC2HC1C
dbVarZC2HC1C
ClinVarZC2HC1C
1000_GenomesZC2HC1C 
Exome Variant ServerZC2HC1C
ExAC (Exome Aggregation Consortium)ENSG00000119703
GNOMAD BrowserENSG00000119703
Genetic variants : HAPMAP79696
Genomic Variants (DGV)ZC2HC1C [DGVbeta]
DECIPHERZC2HC1C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZC2HC1C 
Mutations
ICGC Data PortalZC2HC1C 
TCGA Data PortalZC2HC1C 
Broad Tumor PortalZC2HC1C
OASIS PortalZC2HC1C [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZC2HC1C
BioMutasearch ZC2HC1C
DgiDB (Drug Gene Interaction Database)ZC2HC1C
DoCM (Curated mutations)ZC2HC1C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZC2HC1C (select a term)
intoGenZC2HC1C
Cancer3DZC2HC1C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZC2HC1C
Genetic Testing Registry ZC2HC1C
NextProtQ53FD0 [Medical]
TSGene79696
GENETestsZC2HC1C
Target ValidationZC2HC1C
Huge Navigator ZC2HC1C [HugePedia]
snp3D : Map Gene to Disease79696
BioCentury BCIQZC2HC1C
ClinGenZC2HC1C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79696
Chemical/Pharm GKB GenePA162386996
Clinical trialZC2HC1C
Miscellaneous
canSAR (ICR)ZC2HC1C (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZC2HC1C
EVEXZC2HC1C
GoPubMedZC2HC1C
iHOPZC2HC1C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Nov 9 12:36:15 CET 2017

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