Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZC3H18-AS1 (ZC3H18 antisense RNA 1 (head to head))

Identity

Alias_namesC16orf85
LINC00859
chromosome 16 open reading frame 85
long intergenic non-protein coding RNA 859
Alias_symbol (synonym)FLJ45530
Other alias
HGNC (Hugo) ZC3H18-AS1
LocusID (NCBI) 400555
Atlas_Id 75883
Location 16q24.2  [Link to chromosome band 16q24]
Location_base_pair Starts at 88553704 and ends at 88570140 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ZC3H18-AS1   33799
Cards
Entrez_Gene (NCBI)ZC3H18-AS1  400555  ZC3H18 antisense RNA 1 (head to head)
AliasesC16orf85; LINC00859
GeneCards (Weizmann)ZC3H18-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:88553704-88570140 [Contig_View]  ZC3H18-AS1 [Vega]
TCGA cBioPortalZC3H18-AS1
AceView (NCBI)ZC3H18-AS1
Genatlas (Paris)ZC3H18-AS1
WikiGenes400555
SOURCE (Princeton)ZC3H18-AS1
Genetics Home Reference (NIH)ZC3H18-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZC3H18-AS1  -     chr16:88553704-88570140 -  16q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZC3H18-AS1  -     16q24.2   [Description]    (hg19-Feb_2009)
EnsemblZC3H18-AS1 - 16q24.2 [CytoView hg19]  ZC3H18-AS1 - 16q24.2 [CytoView hg38]
Mapping of homologs : NCBIZC3H18-AS1 [Mapview hg19]  ZC3H18-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127438 BC148581 BC153153
RefSeq transcript (Entrez)NM_001001682
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZC3H18-AS1
Cluster EST : UnigeneHs.120392 [ NCBI ]
CGAP (NCI)Hs.120392
Gene ExpressionZC3H18-AS1 [ NCBI-GEO ]   ZC3H18-AS1 [ EBI - ARRAY_EXPRESS ]   ZC3H18-AS1 [ SEEK ]   ZC3H18-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZC3H18-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400555
GTEX Portal (Tissue expression)ZC3H18-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZC3H18-AS1
DMDM Disease mutations400555
Blocks (Seattle)ZC3H18-AS1
HPRD13509
IPIIPI00401925   
Protein Interaction databases
BioGRIDZC3H18-AS1
STRING (EMBL)ZC3H18-AS1
ZODIACZC3H18-AS1
Ontologies - Pathways
Huge Navigator ZC3H18-AS1 [HugePedia]
snp3D : Map Gene to Disease400555
BioCentury BCIQZC3H18-AS1
ClinGenZC3H18-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400555
Clinical trialZC3H18-AS1
Miscellaneous
canSAR (ICR)ZC3H18-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineZC3H18-AS1
EVEXZC3H18-AS1
GoPubMedZC3H18-AS1
iHOPZC3H18-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:31 CEST 2017

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