ZCRB1 (zinc finger CCHC-type and RNA binding motif containing 1)

2014-11-01 Affiliation

Identity

HGNC

ZCRB1

LOCATION

12q12

LOCUSID

85437

ALIAS

MADP-1,MADP1,RBM36,SNRNP31,ZCCHC19

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 85437
MIM: 610750
HGNC: 29620
Ensembl: ENSG00000139168

Variants:

dbSNP: 85437
ClinVar: 85437
TCGA: ENSG00000139168
COSMIC: ZCRB1

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000139168	ENST00000266529	Q8TBF4
ENSG00000139168	ENST00000266529	A0A024R106
ENSG00000139168	ENST00000552235	F8VXY6
ENSG00000139168	ENST00000552673	G3V1V1

Expression (GTEx)

100

150

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Gene Expression	REACTOME	R-HSA-74160
Processing of Capped Intron-Containing Pre-mRNA	REACTOME	R-HSA-72203
mRNA Splicing	REACTOME	R-HSA-72172
mRNA Splicing - Minor Pathway	REACTOME	R-HSA-72165

References

Pubmed ID	Year	Title	Citations
22362731	2012	Binding of the 5'-untranslated region of coronavirus RNA to zinc finger CCHC-type and RNA-binding motif 1 enhances viral replication and transcription.	12
16959469	2007	Isolation, expression, and characterization of the human ZCRB1 gene mapped to 12q12.	8

Citation

Dessen P

ZCRB1 (zinc finger CCHC-type and RNA binding motif containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75901/zcrb1