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ZDHHC12 (zinc finger DHHC-type containing 12)

Identity

Alias_symbol (synonym)ZNF400
FLJ14524
Other aliasDHHC-12
HGNC (Hugo) ZDHHC12
LocusID (NCBI) 84885
Atlas_Id 75906
Location 9q34.11  [Link to chromosome band 9q34]
Location_base_pair Starts at 128720870 and ends at 128724129 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC12   19159
Cards
Entrez_Gene (NCBI)ZDHHC12  84885  zinc finger DHHC-type containing 12
AliasesDHHC-12; ZNF400
GeneCards (Weizmann)ZDHHC12
Ensembl hg19 (Hinxton)ENSG00000160446 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160446 [Gene_View]  chr9:128720870-128724129 [Contig_View]  ZDHHC12 [Vega]
ICGC DataPortalENSG00000160446
TCGA cBioPortalZDHHC12
AceView (NCBI)ZDHHC12
Genatlas (Paris)ZDHHC12
WikiGenes84885
SOURCE (Princeton)ZDHHC12
Genetics Home Reference (NIH)ZDHHC12
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC12  -     chr9:128720870-128724129 -  9q34.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC12  -     9q34.11   [Description]    (hg19-Feb_2009)
EnsemblZDHHC12 - 9q34.11 [CytoView hg19]  ZDHHC12 - 9q34.11 [CytoView hg38]
Mapping of homologs : NCBIZDHHC12 [Mapview hg19]  ZDHHC12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK027430 AK075332 AK092843 AK315746 BC009280
RefSeq transcript (Entrez)NM_001318015 NM_001318016 NM_001318020 NM_001318023 NM_032799
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC12
Cluster EST : UnigeneHs.133122 [ NCBI ]
CGAP (NCI)Hs.133122
Alternative Splicing GalleryENSG00000160446
Gene ExpressionZDHHC12 [ NCBI-GEO ]   ZDHHC12 [ EBI - ARRAY_EXPRESS ]   ZDHHC12 [ SEEK ]   ZDHHC12 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84885
GTEX Portal (Tissue expression)ZDHHC12
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96GR4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96GR4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96GR4
Splice isoforms : SwissVarQ96GR4
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ96GR4
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC12
DMDM Disease mutations84885
Blocks (Seattle)ZDHHC12
SuperfamilyQ96GR4
Human Protein AtlasENSG00000160446
Peptide AtlasQ96GR4
HPRD15709
IPIIPI00062698   IPI00220186   IPI00395926   IPI00643250   IPI00642782   
Protein Interaction databases
DIP (DOE-UCLA)Q96GR4
IntAct (EBI)Q96GR4
FunCoupENSG00000160446
BioGRIDZDHHC12
STRING (EMBL)ZDHHC12
ZODIACZDHHC12
Ontologies - Pathways
QuickGOQ96GR4
Ontology : AmiGOendoplasmic reticulum  Golgi apparatus  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
Ontology : EGO-EBIendoplasmic reticulum  Golgi apparatus  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
NDEx NetworkZDHHC12
Atlas of Cancer Signalling NetworkZDHHC12
Wikipedia pathwaysZDHHC12
Orthology - Evolution
OrthoDB84885
GeneTree (enSembl)ENSG00000160446
Phylogenetic Trees/Animal Genes : TreeFamZDHHC12
HOVERGENQ96GR4
HOGENOMQ96GR4
Homologs : HomoloGeneZDHHC12
Homology/Alignments : Family Browser (UCSC)ZDHHC12
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC12 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC12
dbVarZDHHC12
ClinVarZDHHC12
1000_GenomesZDHHC12 
Exome Variant ServerZDHHC12
ExAC (Exome Aggregation Consortium)ZDHHC12 (select the gene name)
Genetic variants : HAPMAP84885
Genomic Variants (DGV)ZDHHC12 [DGVbeta]
DECIPHERZDHHC12 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC12 
Mutations
ICGC Data PortalZDHHC12 
TCGA Data PortalZDHHC12 
Broad Tumor PortalZDHHC12
OASIS PortalZDHHC12 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC12  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC12
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC12
DgiDB (Drug Gene Interaction Database)ZDHHC12
DoCM (Curated mutations)ZDHHC12 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC12 (select a term)
intoGenZDHHC12
Cancer3DZDHHC12(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZDHHC12
Genetic Testing Registry ZDHHC12
NextProtQ96GR4 [Medical]
TSGene84885
GENETestsZDHHC12
Target ValidationZDHHC12
Huge Navigator ZDHHC12 [HugePedia]
snp3D : Map Gene to Disease84885
BioCentury BCIQZDHHC12
ClinGenZDHHC12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84885
Chemical/Pharm GKB GenePA38802
Clinical trialZDHHC12
Miscellaneous
canSAR (ICR)ZDHHC12 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC12
EVEXZDHHC12
GoPubMedZDHHC12
iHOPZDHHC12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:13 CEST 2017

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