Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZDHHC14 (zinc finger DHHC-type containing 14)

Identity

Alias_symbol (synonym)FLJ20984
NEW1CP
Other alias
HGNC (Hugo) ZDHHC14
LocusID (NCBI) 79683
Atlas_Id 53911
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 157381525 and ends at 157673945 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANKRD6 (6q15) / ZDHHC14 (6q25.3)ATL3 (11q12.3) / ZDHHC14 (6q25.3)RMND1 (6q25.1) / ZDHHC14 (6q25.3)
SYNJ2 (6q25.3) / ZDHHC14 (6q25.3)TAF3 (10p14) / ZDHHC14 (6q25.3)TULP4 (6q25.3) / ZDHHC14 (6q25.3)
ZDHHC14 (6q25.3) / PAWR (12q21.2)ZDHHC14 (6q25.3) / TMEM242 (6q25.3)ANKRD6 6q15 / ZDHHC14 6q25.3
ATL3 11q12.3 / ZDHHC14 6q25.3RMND1 6q25.1 / ZDHHC14 6q25.3SYNJ2 6q25.3 / ZDHHC14 6q25.3
TAF3 10p14 / ZDHHC14 6q25.3TULP4 6q25.3 / ZDHHC14 6q25.3ZDHHC14 6q25.3 C6orf35

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC14   20341
Cards
Entrez_Gene (NCBI)ZDHHC14  79683  zinc finger DHHC-type containing 14
AliasesNEW1CP
GeneCards (Weizmann)ZDHHC14
Ensembl hg19 (Hinxton)ENSG00000175048 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175048 [Gene_View]  chr6:157381525-157673945 [Contig_View]  ZDHHC14 [Vega]
ICGC DataPortalENSG00000175048
TCGA cBioPortalZDHHC14
AceView (NCBI)ZDHHC14
Genatlas (Paris)ZDHHC14
WikiGenes79683
SOURCE (Princeton)ZDHHC14
Genetics Home Reference (NIH)ZDHHC14
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC14  -     chr6:157381525-157673945 +  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC14  -     6q25.3   [Description]    (hg19-Feb_2009)
EnsemblZDHHC14 - 6q25.3 [CytoView hg19]  ZDHHC14 - 6q25.3 [CytoView hg38]
Mapping of homologs : NCBIZDHHC14 [Mapview hg19]  ZDHHC14 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF542388 AF542389 AJ420552 AK024637 AK092380
RefSeq transcript (Entrez)NM_024630 NM_153746
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC14
Cluster EST : UnigeneHs.745003 [ NCBI ]
CGAP (NCI)Hs.745003
Alternative Splicing GalleryENSG00000175048
Gene ExpressionZDHHC14 [ NCBI-GEO ]   ZDHHC14 [ EBI - ARRAY_EXPRESS ]   ZDHHC14 [ SEEK ]   ZDHHC14 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79683
GTEX Portal (Tissue expression)ZDHHC14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZN3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZN3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZN3
Splice isoforms : SwissVarQ8IZN3
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ8IZN3
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC14
DMDM Disease mutations79683
Blocks (Seattle)ZDHHC14
SuperfamilyQ8IZN3
Human Protein AtlasENSG00000175048
Peptide AtlasQ8IZN3
HPRD15711
IPIIPI00413406   IPI00170691   IPI01014706   IPI00552438   IPI00977137   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZN3
IntAct (EBI)Q8IZN3
FunCoupENSG00000175048
BioGRIDZDHHC14
STRING (EMBL)ZDHHC14
ZODIACZDHHC14
Ontologies - Pathways
QuickGOQ8IZN3
Ontology : AmiGOendoplasmic reticulum  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
Ontology : EGO-EBIendoplasmic reticulum  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
NDEx NetworkZDHHC14
Atlas of Cancer Signalling NetworkZDHHC14
Wikipedia pathwaysZDHHC14
Orthology - Evolution
OrthoDB79683
GeneTree (enSembl)ENSG00000175048
Phylogenetic Trees/Animal Genes : TreeFamZDHHC14
HOVERGENQ8IZN3
HOGENOMQ8IZN3
Homologs : HomoloGeneZDHHC14
Homology/Alignments : Family Browser (UCSC)ZDHHC14
Gene fusions - Rearrangements
Fusion : MitelmanANKRD6/ZDHHC14 [6q15/6q25.3]  [t(6;6)(q15;q25)]  
Fusion : MitelmanATL3/ZDHHC14 [11q12.3/6q25.3]  [t(6;11)(q25;q13)]  
Fusion : MitelmanRMND1/ZDHHC14 [6q25.1/6q25.3]  [t(6;6)(q25;q25)]  
Fusion : MitelmanSYNJ2/ZDHHC14 [6q25.3/6q25.3]  [t(6;6)(q25;q25)]  
Fusion : MitelmanTAF3/ZDHHC14 [10p14/6q25.3]  [t(6;10)(q25;p14)]  
Fusion : MitelmanTULP4/ZDHHC14 [6q25.3/6q25.3]  [t(6;6)(q25;q25)]  
Fusion : MitelmanZDHHC14/PAWR [6q25.3/12q21.2]  [t(6;12)(q25;q21)]  
Fusion : MitelmanZDHHC14/TMEM242 [6q25.3/6q25.3]  [t(6;6)(q25;q25)]  
Fusion: TCGAANKRD6 6q15 ZDHHC14 6q25.3 LGG
Fusion: TCGAATL3 11q12.3 ZDHHC14 6q25.3 SKCM
Fusion: TCGARMND1 6q25.1 ZDHHC14 6q25.3 BRCA
Fusion: TCGASYNJ2 6q25.3 ZDHHC14 6q25.3 BRCA
Fusion: TCGATAF3 10p14 ZDHHC14 6q25.3 THCA
Fusion: TCGATULP4 6q25.3 ZDHHC14 6q25.3 BLCA
Fusion: TCGAZDHHC14 6q25.3 C6orf35 THCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC14
dbVarZDHHC14
ClinVarZDHHC14
1000_GenomesZDHHC14 
Exome Variant ServerZDHHC14
ExAC (Exome Aggregation Consortium)ZDHHC14 (select the gene name)
Genetic variants : HAPMAP79683
Genomic Variants (DGV)ZDHHC14 [DGVbeta]
DECIPHERZDHHC14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC14 
Mutations
ICGC Data PortalZDHHC14 
TCGA Data PortalZDHHC14 
Broad Tumor PortalZDHHC14
OASIS PortalZDHHC14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC14
DgiDB (Drug Gene Interaction Database)ZDHHC14
DoCM (Curated mutations)ZDHHC14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC14 (select a term)
intoGenZDHHC14
Cancer3DZDHHC14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZDHHC14
Genetic Testing Registry ZDHHC14
NextProtQ8IZN3 [Medical]
TSGene79683
GENETestsZDHHC14
Target ValidationZDHHC14
Huge Navigator ZDHHC14 [HugePedia]
snp3D : Map Gene to Disease79683
BioCentury BCIQZDHHC14
ClinGenZDHHC14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79683
Chemical/Pharm GKB GenePA134935513
Clinical trialZDHHC14
Miscellaneous
canSAR (ICR)ZDHHC14 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC14
EVEXZDHHC14
GoPubMedZDHHC14
iHOPZDHHC14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 17:19:15 CEST 2017

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