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ZDHHC16 (zinc finger DHHC-type palmitoyltransferase 16)

Identity

Alias (NCBI)APH2
DHHC-16
HGNC (Hugo) ZDHHC16
HGNC Alias symbAPH2
LocusID (NCBI) 84287
Atlas_Id 75908
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 97446175 and ends at 97457370 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GGNBP2 (17q12) / ZDHHC16 (10q24.1)LOC285441 () / ZDHHC16 (10q24.1)NAA10 (Xq28) / ZDHHC16 (10q24.1)
ZDHHC16 (10q24.1) / PFKL (21q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZDHHC16   20714
Cards
Entrez_Gene (NCBI)ZDHHC16    zinc finger DHHC-type palmitoyltransferase 16
AliasesAPH2; DHHC-16
GeneCards (Weizmann)ZDHHC16
Ensembl hg19 (Hinxton)ENSG00000171307 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171307 [Gene_View]  ENSG00000171307 [Sequence]  chr10:97446175-97457370 [Contig_View]  ZDHHC16 [Vega]
ICGC DataPortalENSG00000171307
TCGA cBioPortalZDHHC16
AceView (NCBI)ZDHHC16
Genatlas (Paris)ZDHHC16
SOURCE (Princeton)ZDHHC16
Genetics Home Reference (NIH)ZDHHC16
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC16  -     chr10:97446175-97457370 +  10q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC16  -     10q24.1   [Description]    (hg19-Feb_2009)
GoldenPathZDHHC16 - 10q24.1 [CytoView hg19]  ZDHHC16 - 10q24.1 [CytoView hg38]
ImmunoBaseENSG00000171307
Genome Data Viewer NCBIZDHHC16 [Mapview hg19]  
OMIM616750   
Gene and transcription
Genbank (Entrez)AB209272 AF258563 AJ294945 AK074427 AK297962
RefSeq transcript (Entrez)NM_001287803 NM_001287804 NM_032327 NM_198043 NM_198044 NM_198045 NM_198046
Consensus coding sequences : CCDS (NCBI)ZDHHC16
Gene ExpressionZDHHC16 [ NCBI-GEO ]   ZDHHC16 [ EBI - ARRAY_EXPRESS ]   ZDHHC16 [ SEEK ]   ZDHHC16 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC16 [ Firebrowse - Broad ]
GenevisibleExpression of ZDHHC16 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84287
GTEX Portal (Tissue expression)ZDHHC16
Human Protein AtlasENSG00000171307-ZDHHC16 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969W1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969W1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969W1
PhosPhoSitePlusQ969W1
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC    ZDH16   
Domain families : Pfam (Sanger)DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC16
SuperfamilyQ969W1
AlphaFold pdb e-kbQ969W1   
Human Protein Atlas [tissue]ENSG00000171307-ZDHHC16 [tissue]
HPRD15712
Protein Interaction databases
DIP (DOE-UCLA)Q969W1
IntAct (EBI)Q969W1
BioGRIDZDHHC16
STRING (EMBL)ZDHHC16
ZODIACZDHHC16
Ontologies - Pathways
QuickGOQ969W1
Ontology : AmiGOeye development  protein binding  endoplasmic reticulum membrane  Golgi apparatus  apoptotic process  cellular response to DNA damage stimulus  heart development  integral component of membrane  palmitoyltransferase activity  palmitoyltransferase activity  protein palmitoylation  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  telencephalon development  
Ontology : EGO-EBIeye development  protein binding  endoplasmic reticulum membrane  Golgi apparatus  apoptotic process  cellular response to DNA damage stimulus  heart development  integral component of membrane  palmitoyltransferase activity  palmitoyltransferase activity  protein palmitoylation  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  telencephalon development  
NDEx NetworkZDHHC16
Atlas of Cancer Signalling NetworkZDHHC16
Wikipedia pathwaysZDHHC16
Orthology - Evolution
OrthoDB84287
GeneTree (enSembl)ENSG00000171307
Phylogenetic Trees/Animal Genes : TreeFamZDHHC16
Homologs : HomoloGeneZDHHC16
Homology/Alignments : Family Browser (UCSC)ZDHHC16
Gene fusions - Rearrangements
Fusion : QuiverZDHHC16
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC16 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC16
dbVarZDHHC16
ClinVarZDHHC16
MonarchZDHHC16
1000_GenomesZDHHC16 
Exome Variant ServerZDHHC16
GNOMAD BrowserENSG00000171307
Varsome BrowserZDHHC16
ACMGZDHHC16 variants
VarityQ969W1
Genomic Variants (DGV)ZDHHC16 [DGVbeta]
DECIPHERZDHHC16 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC16 
Mutations
ICGC Data PortalZDHHC16 
TCGA Data PortalZDHHC16 
Broad Tumor PortalZDHHC16
OASIS PortalZDHHC16 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC16  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZDHHC16
Mutations and Diseases : HGMDZDHHC16
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZDHHC16
DgiDB (Drug Gene Interaction Database)ZDHHC16
DoCM (Curated mutations)ZDHHC16
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC16
Cancer3DZDHHC16
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616750   
Orphanet
DisGeNETZDHHC16
MedgenZDHHC16
Genetic Testing Registry ZDHHC16
NextProtQ969W1 [Medical]
GENETestsZDHHC16
Target ValidationZDHHC16
Huge Navigator ZDHHC16 [HugePedia]
ClinGenZDHHC16
Clinical trials, drugs, therapy
MyCancerGenomeZDHHC16
Protein Interactions : CTDZDHHC16
Pharm GKB GenePA134985701
PharosQ969W1
Clinical trialZDHHC16
Miscellaneous
canSAR (ICR)ZDHHC16
HarmonizomeZDHHC16
DataMed IndexZDHHC16
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZDHHC16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:28:59 CEST 2021

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