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ZDHHC16 (zinc finger DHHC-type containing 16)

Identity

Alias_symbol (synonym)APH2
Other aliasDHHC-16
HGNC (Hugo) ZDHHC16
LocusID (NCBI) 84287
Atlas_Id 75908
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 97446131 and ends at 97457370 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GGNBP2 (17q12) / ZDHHC16 (10q24.1)LOC285441 () / ZDHHC16 (10q24.1)NAA10 (Xq28) / ZDHHC16 (10q24.1)
ZDHHC16 (10q24.1) / PFKL (21q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC16   20714
Cards
Entrez_Gene (NCBI)ZDHHC16  84287  zinc finger DHHC-type containing 16
AliasesAPH2; DHHC-16
GeneCards (Weizmann)ZDHHC16
Ensembl hg19 (Hinxton)ENSG00000171307 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171307 [Gene_View]  chr10:97446131-97457370 [Contig_View]  ZDHHC16 [Vega]
ICGC DataPortalENSG00000171307
TCGA cBioPortalZDHHC16
AceView (NCBI)ZDHHC16
Genatlas (Paris)ZDHHC16
WikiGenes84287
SOURCE (Princeton)ZDHHC16
Genetics Home Reference (NIH)ZDHHC16
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC16  -     chr10:97446131-97457370 +  10q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC16  -     10q24.1   [Description]    (hg19-Feb_2009)
EnsemblZDHHC16 - 10q24.1 [CytoView hg19]  ZDHHC16 - 10q24.1 [CytoView hg38]
Mapping of homologs : NCBIZDHHC16 [Mapview hg19]  ZDHHC16 [Mapview hg38]
OMIM616750   
Gene and transcription
Genbank (Entrez)AB209272 AF258563 AJ294945 AK074427 AK297962
RefSeq transcript (Entrez)NM_001287803 NM_001287804 NM_032327 NM_198043 NM_198044 NM_198045 NM_198046
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC16
Cluster EST : UnigeneHs.76662 [ NCBI ]
CGAP (NCI)Hs.76662
Alternative Splicing GalleryENSG00000171307
Gene ExpressionZDHHC16 [ NCBI-GEO ]   ZDHHC16 [ EBI - ARRAY_EXPRESS ]   ZDHHC16 [ SEEK ]   ZDHHC16 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC16 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84287
GTEX Portal (Tissue expression)ZDHHC16
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969W1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969W1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969W1
Splice isoforms : SwissVarQ969W1
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ969W1
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC16
DMDM Disease mutations84287
Blocks (Seattle)ZDHHC16
SuperfamilyQ969W1
Human Protein AtlasENSG00000171307
Peptide AtlasQ969W1
HPRD15712
IPIIPI00056515   IPI00179254   IPI00166826   IPI00553203   IPI00644392   IPI01010599   IPI00552456   IPI00552294   IPI00646353   
Protein Interaction databases
DIP (DOE-UCLA)Q969W1
IntAct (EBI)Q969W1
FunCoupENSG00000171307
BioGRIDZDHHC16
STRING (EMBL)ZDHHC16
ZODIACZDHHC16
Ontologies - Pathways
QuickGOQ969W1
Ontology : AmiGOendoplasmic reticulum membrane  apoptotic process  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
Ontology : EGO-EBIendoplasmic reticulum membrane  apoptotic process  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  
NDEx NetworkZDHHC16
Atlas of Cancer Signalling NetworkZDHHC16
Wikipedia pathwaysZDHHC16
Orthology - Evolution
OrthoDB84287
GeneTree (enSembl)ENSG00000171307
Phylogenetic Trees/Animal Genes : TreeFamZDHHC16
HOVERGENQ969W1
HOGENOMQ969W1
Homologs : HomoloGeneZDHHC16
Homology/Alignments : Family Browser (UCSC)ZDHHC16
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC16 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC16
dbVarZDHHC16
ClinVarZDHHC16
1000_GenomesZDHHC16 
Exome Variant ServerZDHHC16
ExAC (Exome Aggregation Consortium)ZDHHC16 (select the gene name)
Genetic variants : HAPMAP84287
Genomic Variants (DGV)ZDHHC16 [DGVbeta]
DECIPHERZDHHC16 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC16 
Mutations
ICGC Data PortalZDHHC16 
TCGA Data PortalZDHHC16 
Broad Tumor PortalZDHHC16
OASIS PortalZDHHC16 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC16  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC16
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC16
DgiDB (Drug Gene Interaction Database)ZDHHC16
DoCM (Curated mutations)ZDHHC16 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC16 (select a term)
intoGenZDHHC16
Cancer3DZDHHC16(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616750   
Orphanet
MedgenZDHHC16
Genetic Testing Registry ZDHHC16
NextProtQ969W1 [Medical]
TSGene84287
GENETestsZDHHC16
Target ValidationZDHHC16
Huge Navigator ZDHHC16 [HugePedia]
snp3D : Map Gene to Disease84287
BioCentury BCIQZDHHC16
ClinGenZDHHC16
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84287
Chemical/Pharm GKB GenePA134985701
Clinical trialZDHHC16
Miscellaneous
canSAR (ICR)ZDHHC16 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC16
EVEXZDHHC16
GoPubMedZDHHC16
iHOPZDHHC16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:37 CEST 2017

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