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ZDHHC18 (zinc finger DHHC-type containing 18)

Identity

Alias_symbol (synonym)DKFZp667O2416
Other aliasDHHC-18
DHHC18
HGNC (Hugo) ZDHHC18
LocusID (NCBI) 84243
Atlas_Id 75909
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 26826710 and ends at 26855720 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NUP85 (17q25.1) / ZDHHC18 (1p36.11)PIGV (1p36.11) / ZDHHC18 (1p36.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC18   20712
Cards
Entrez_Gene (NCBI)ZDHHC18  84243  zinc finger DHHC-type containing 18
AliasesDHHC-18; DHHC18
GeneCards (Weizmann)ZDHHC18
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:26826710-26855720 [Contig_View]  ZDHHC18 [Vega]
TCGA cBioPortalZDHHC18
AceView (NCBI)ZDHHC18
Genatlas (Paris)ZDHHC18
WikiGenes84243
SOURCE (Princeton)ZDHHC18
Genetics Home Reference (NIH)ZDHHC18
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC18  -     chr1:26826710-26855720 +  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC18  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblZDHHC18 - 1p36.11 [CytoView hg19]  ZDHHC18 - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIZDHHC18 [Mapview hg19]  ZDHHC18 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056427 AK298683 AL512765 BC066776
RefSeq transcript (Entrez)NM_032283
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC18
Cluster EST : UnigeneHs.523710 [ NCBI ]
CGAP (NCI)Hs.523710
Gene ExpressionZDHHC18 [ NCBI-GEO ]   ZDHHC18 [ EBI - ARRAY_EXPRESS ]   ZDHHC18 [ SEEK ]   ZDHHC18 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC18 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84243
GTEX Portal (Tissue expression)ZDHHC18
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NUE0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NUE0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NUE0
Splice isoforms : SwissVarQ9NUE0
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ9NUE0
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC18
DMDM Disease mutations84243
Blocks (Seattle)ZDHHC18
SuperfamilyQ9NUE0
Peptide AtlasQ9NUE0
HPRD15713
IPIIPI00183979   IPI00974527   IPI00983198   IPI00983868   
Protein Interaction databases
DIP (DOE-UCLA)Q9NUE0
IntAct (EBI)Q9NUE0
BioGRIDZDHHC18
STRING (EMBL)ZDHHC18
ZODIACZDHHC18
Ontologies - Pathways
QuickGOQ9NUE0
Ontology : AmiGOGolgi apparatus  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  cellular protein localization  
Ontology : EGO-EBIGolgi apparatus  integral component of membrane  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  cellular protein localization  
NDEx NetworkZDHHC18
Atlas of Cancer Signalling NetworkZDHHC18
Wikipedia pathwaysZDHHC18
Orthology - Evolution
OrthoDB84243
Phylogenetic Trees/Animal Genes : TreeFamZDHHC18
HOVERGENQ9NUE0
HOGENOMQ9NUE0
Homologs : HomoloGeneZDHHC18
Homology/Alignments : Family Browser (UCSC)ZDHHC18
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC18 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC18
dbVarZDHHC18
ClinVarZDHHC18
1000_GenomesZDHHC18 
Exome Variant ServerZDHHC18
ExAC (Exome Aggregation Consortium)ZDHHC18 (select the gene name)
Genetic variants : HAPMAP84243
Genomic Variants (DGV)ZDHHC18 [DGVbeta]
DECIPHERZDHHC18 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC18 
Mutations
ICGC Data PortalZDHHC18 
TCGA Data PortalZDHHC18 
Broad Tumor PortalZDHHC18
OASIS PortalZDHHC18 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC18  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC18
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC18
DgiDB (Drug Gene Interaction Database)ZDHHC18
DoCM (Curated mutations)ZDHHC18 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC18 (select a term)
intoGenZDHHC18
Cancer3DZDHHC18(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZDHHC18
Genetic Testing Registry ZDHHC18
NextProtQ9NUE0 [Medical]
TSGene84243
GENETestsZDHHC18
Target ValidationZDHHC18
Huge Navigator ZDHHC18 [HugePedia]
snp3D : Map Gene to Disease84243
BioCentury BCIQZDHHC18
ClinGenZDHHC18
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84243
Chemical/Pharm GKB GenePA134968241
Clinical trialZDHHC18
Miscellaneous
canSAR (ICR)ZDHHC18 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC18
EVEXZDHHC18
GoPubMedZDHHC18
iHOPZDHHC18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:49:37 CEST 2017

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