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ZDHHC2 (zinc finger DHHC-type containing 2)

Identity

Alias_symbol (synonym)ZNF372
Other aliasDHHC2
HGNC (Hugo) ZDHHC2
LocusID (NCBI) 51201
Atlas_Id 42865
Location 8p22  [Link to chromosome band 8p22]
Location_base_pair Starts at 17156327 and ends at 17222732 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ALB (4q13.3) / ZDHHC2 (8p22)ITGA3 (17q21.33) / ZDHHC2 (8p22)PPP2R2A (8p21.2) / ZDHHC2 (8p22)
PPP2R2A 8p21.2 / ZDHHC2 8p22

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC2   18469
Cards
Entrez_Gene (NCBI)ZDHHC2  51201  zinc finger DHHC-type containing 2
AliasesDHHC2; ZNF372
GeneCards (Weizmann)ZDHHC2
Ensembl hg19 (Hinxton)ENSG00000104219 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104219 [Gene_View]  chr8:17156327-17222732 [Contig_View]  ZDHHC2 [Vega]
ICGC DataPortalENSG00000104219
TCGA cBioPortalZDHHC2
AceView (NCBI)ZDHHC2
Genatlas (Paris)ZDHHC2
WikiGenes51201
SOURCE (Princeton)ZDHHC2
Genetics Home Reference (NIH)ZDHHC2
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC2  -     chr8:17156327-17222732 +  8p22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC2  -     8p22   [Description]    (hg19-Feb_2009)
EnsemblZDHHC2 - 8p22 [CytoView hg19]  ZDHHC2 - 8p22 [CytoView hg38]
Mapping of homologs : NCBIZDHHC2 [Mapview hg19]  ZDHHC2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB023584 AK001608 AK123645 BC039253 BC050272
RefSeq transcript (Entrez)NM_016353
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC2
Cluster EST : UnigeneHs.744097 [ NCBI ]
CGAP (NCI)Hs.744097
Alternative Splicing GalleryENSG00000104219
Gene ExpressionZDHHC2 [ NCBI-GEO ]   ZDHHC2 [ EBI - ARRAY_EXPRESS ]   ZDHHC2 [ SEEK ]   ZDHHC2 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51201
GTEX Portal (Tissue expression)ZDHHC2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UIJ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UIJ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UIJ5
Splice isoforms : SwissVarQ9UIJ5
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ9UIJ5
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC2
DMDM Disease mutations51201
Blocks (Seattle)ZDHHC2
SuperfamilyQ9UIJ5
Human Protein AtlasENSG00000104219
Peptide AtlasQ9UIJ5
HPRD15715
IPIIPI00008896   IPI00976429   IPI00977080   
Protein Interaction databases
DIP (DOE-UCLA)Q9UIJ5
IntAct (EBI)Q9UIJ5
FunCoupENSG00000104219
BioGRIDZDHHC2
STRING (EMBL)ZDHHC2
ZODIACZDHHC2
Ontologies - Pathways
QuickGOQ9UIJ5
Ontology : AmiGOendoplasmic reticulum  Golgi apparatus  plasma membrane  integral component of plasma membrane  palmitoyltransferase activity  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  cellular protein metabolic process  recycling endosome membrane  
Ontology : EGO-EBIendoplasmic reticulum  Golgi apparatus  plasma membrane  integral component of plasma membrane  palmitoyltransferase activity  palmitoyltransferase activity  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  cellular protein metabolic process  recycling endosome membrane  
NDEx NetworkZDHHC2
Atlas of Cancer Signalling NetworkZDHHC2
Wikipedia pathwaysZDHHC2
Orthology - Evolution
OrthoDB51201
GeneTree (enSembl)ENSG00000104219
Phylogenetic Trees/Animal Genes : TreeFamZDHHC2
HOVERGENQ9UIJ5
HOGENOMQ9UIJ5
Homologs : HomoloGeneZDHHC2
Homology/Alignments : Family Browser (UCSC)ZDHHC2
Gene fusions - Rearrangements
Fusion : MitelmanPPP2R2A/ZDHHC2 [8p21.2/8p22]  [t(8;8)(p21;p22)]  
Fusion: TCGAPPP2R2A 8p21.2 ZDHHC2 8p22 OV
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC2
dbVarZDHHC2
ClinVarZDHHC2
1000_GenomesZDHHC2 
Exome Variant ServerZDHHC2
ExAC (Exome Aggregation Consortium)ZDHHC2 (select the gene name)
Genetic variants : HAPMAP51201
Genomic Variants (DGV)ZDHHC2 [DGVbeta]
DECIPHERZDHHC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC2 
Mutations
ICGC Data PortalZDHHC2 
TCGA Data PortalZDHHC2 
Broad Tumor PortalZDHHC2
OASIS PortalZDHHC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC2
DgiDB (Drug Gene Interaction Database)ZDHHC2
DoCM (Curated mutations)ZDHHC2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC2 (select a term)
intoGenZDHHC2
Cancer3DZDHHC2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZDHHC2
Genetic Testing Registry ZDHHC2
NextProtQ9UIJ5 [Medical]
TSGene51201
GENETestsZDHHC2
Target ValidationZDHHC2
Huge Navigator ZDHHC2 [HugePedia]
snp3D : Map Gene to Disease51201
BioCentury BCIQZDHHC2
ClinGenZDHHC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51201
Chemical/Pharm GKB GenePA38336
Clinical trialZDHHC2
Miscellaneous
canSAR (ICR)ZDHHC2 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC2
EVEXZDHHC2
GoPubMedZDHHC2
iHOPZDHHC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:03:24 CEST 2017

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