Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZDHHC22 (zinc finger DHHC-type containing 22)

Identity

Alias_namesC14orf59
chromosome 14 open reading frame 59
Other alias
HGNC (Hugo) ZDHHC22
LocusID (NCBI) 283576
Atlas_Id 75912
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 77131270 and ends at 77141791 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NOLC1 (10q24.32) / ZDHHC22 (14q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZDHHC22   20106
Cards
Entrez_Gene (NCBI)ZDHHC22  283576  zinc finger DHHC-type containing 22
AliasesC14orf59
GeneCards (Weizmann)ZDHHC22
Ensembl hg19 (Hinxton)ENSG00000177108 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177108 [Gene_View]  chr14:77131270-77141791 [Contig_View]  ZDHHC22 [Vega]
ICGC DataPortalENSG00000177108
TCGA cBioPortalZDHHC22
AceView (NCBI)ZDHHC22
Genatlas (Paris)ZDHHC22
WikiGenes283576
SOURCE (Princeton)ZDHHC22
Genetics Home Reference (NIH)ZDHHC22
Genomic and cartography
GoldenPath hg38 (UCSC)ZDHHC22  -     chr14:77131270-77141791 -  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZDHHC22  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblZDHHC22 - 14q24.3 [CytoView hg19]  ZDHHC22 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIZDHHC22 [Mapview hg19]  ZDHHC22 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095612 AK294840 BC035881 BC117676 DA496626
RefSeq transcript (Entrez)NM_174976
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZDHHC22
Cluster EST : UnigeneHs.525485 [ NCBI ]
CGAP (NCI)Hs.525485
Alternative Splicing GalleryENSG00000177108
Gene ExpressionZDHHC22 [ NCBI-GEO ]   ZDHHC22 [ EBI - ARRAY_EXPRESS ]   ZDHHC22 [ SEEK ]   ZDHHC22 [ MEM ]
Gene Expression Viewer (FireBrowse)ZDHHC22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283576
GTEX Portal (Tissue expression)ZDHHC22
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N966   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N966  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N966
Splice isoforms : SwissVarQ8N966
Catalytic activity : Enzyme2.3.1.225 [ Enzyme-Expasy ]   2.3.1.2252.3.1.225 [ IntEnz-EBI ]   2.3.1.225 [ BRENDA ]   2.3.1.225 [ KEGG ]   
PhosPhoSitePlusQ8N966
Domaine pattern : Prosite (Expaxy)DHHC (PS50216)    SSD (PS50156)   
Domains : Interpro (EBI)Palmitoyltrfase_DHHC    SSD   
Domain families : Pfam (Sanger)zf-DHHC (PF01529)   
Domain families : Pfam (NCBI)pfam01529   
Conserved Domain (NCBI)ZDHHC22
DMDM Disease mutations283576
Blocks (Seattle)ZDHHC22
SuperfamilyQ8N966
Human Protein AtlasENSG00000177108
Peptide AtlasQ8N966
HPRD12655
IPIIPI00167616   IPI01024918   IPI01025510   
Protein Interaction databases
DIP (DOE-UCLA)Q8N966
IntAct (EBI)Q8N966
FunCoupENSG00000177108
BioGRIDZDHHC22
STRING (EMBL)ZDHHC22
ZODIACZDHHC22
Ontologies - Pathways
QuickGOQ8N966
Ontology : AmiGOprotein binding  endoplasmic reticulum  Golgi apparatus  integral component of membrane  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  protein localization to plasma membrane  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum  Golgi apparatus  integral component of membrane  protein palmitoylation  protein-cysteine S-palmitoyltransferase activity  protein localization to plasma membrane  
NDEx NetworkZDHHC22
Atlas of Cancer Signalling NetworkZDHHC22
Wikipedia pathwaysZDHHC22
Orthology - Evolution
OrthoDB283576
GeneTree (enSembl)ENSG00000177108
Phylogenetic Trees/Animal Genes : TreeFamZDHHC22
HOVERGENQ8N966
HOGENOMQ8N966
Homologs : HomoloGeneZDHHC22
Homology/Alignments : Family Browser (UCSC)ZDHHC22
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZDHHC22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZDHHC22
dbVarZDHHC22
ClinVarZDHHC22
1000_GenomesZDHHC22 
Exome Variant ServerZDHHC22
ExAC (Exome Aggregation Consortium)ZDHHC22 (select the gene name)
Genetic variants : HAPMAP283576
Genomic Variants (DGV)ZDHHC22 [DGVbeta]
DECIPHERZDHHC22 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZDHHC22 
Mutations
ICGC Data PortalZDHHC22 
TCGA Data PortalZDHHC22 
Broad Tumor PortalZDHHC22
OASIS PortalZDHHC22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZDHHC22  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZDHHC22
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZDHHC22
DgiDB (Drug Gene Interaction Database)ZDHHC22
DoCM (Curated mutations)ZDHHC22 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZDHHC22 (select a term)
intoGenZDHHC22
Cancer3DZDHHC22(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZDHHC22
Genetic Testing Registry ZDHHC22
NextProtQ8N966 [Medical]
TSGene283576
GENETestsZDHHC22
Target ValidationZDHHC22
Huge Navigator ZDHHC22 [HugePedia]
snp3D : Map Gene to Disease283576
BioCentury BCIQZDHHC22
ClinGenZDHHC22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283576
Chemical/Pharm GKB GenePA134952477
Clinical trialZDHHC22
Miscellaneous
canSAR (ICR)ZDHHC22 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZDHHC22
EVEXZDHHC22
GoPubMedZDHHC22
iHOPZDHHC22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:14 CEST 2017

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